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Complex models, such as neural networks (NNs), are comprised of many interrelated components. In order to represent these models, eliciting and characterising the relations between components is essential. Perhaps because of this, diagrams,…

Human-Computer Interaction · Computer Science 2022-06-13 Guy Clarke Marshall , Caroline Jay , Andre Freitas

Diagrams matter. Unfortunately, the deep learning community has no standard method for diagramming architectures. The current combination of linear algebra notation and ad-hoc diagrams fails to offer the necessary precision to understand…

Machine Learning · Computer Science 2024-02-09 Vincent Abbott

We derive representation theorems for exchangeable distributions on finite and infinite graphs using elementary arguments based on geometric and graph-theoretic concepts. Our results elucidate some of the key differences, and their…

Statistics Theory · Mathematics 2018-09-18 Steffen L. Lauritzen , Alessandro Rinaldo , Kayvan Sadeghi

A universal cycle is a compact listing of a class of combinatorial objects. In this paper, we prove the existence of universal cycles of classes of labeled graphs, including simple graphs, trees, graphs with m edges, graphs with loops,…

Combinatorics · Mathematics 2009-11-02 Greg Brockman , Bill Kay , Emma E. Snively

Many real life networks present an average path length logarithmic with the number of nodes and a degree distribution which follows a power law. Often these networks have also a modular and self-similar structure and, in some cases -…

Statistical Mechanics · Physics 2009-02-26 Alicia Miralles , Lichao Chen , Zhongzhi Zhang , Francesc Comellas

Graph-structured data are pervasive across domains including social networks, biological networks, and knowledge graphs. Due to their non-Euclidean nature, such data pose significant challenges to conventional machine learning methods. This…

Machine Learning · Computer Science 2025-07-29 Yihan Wang , Jianing Zhao

Simultaneous embedding is concerned with simultaneously representing a series of graphs sharing some or all vertices. This forms the basis for the visualization of dynamic graphs and thus is an important field of research. Recently there…

Data Structures and Algorithms · Computer Science 2015-06-22 Thomas Bläsius , Stephen G. Kobourov , Ignaz Rutter

Boolean circuit is a computational graph that consists of the dynamic directed graph structure and static functionality. The commonly used logic optimization and Boolean matching-based transformation can change the behavior of the Boolean…

Machine Learning · Computer Science 2024-11-19 Liwei Ni , Xinquan Li , Biwei Xie , Huawei Li

This paper addresses the challenging problem of retrieval and matching of graph structured objects, and makes two key contributions. First, we demonstrate how Graph Neural Networks (GNN), which have emerged as an effective model for various…

Machine Learning · Computer Science 2019-05-14 Yujia Li , Chenjie Gu , Thomas Dullien , Oriol Vinyals , Pushmeet Kohli

Sentence ordering is to restore the original paragraph from a set of sentences. It involves capturing global dependencies among sentences regardless of their input order. In this paper, we propose a novel and flexible graph-based neural…

Computation and Language · Computer Science 2019-12-17 Yongjing Yin , Linfeng Song , Jinsong Su , Jiali Zeng , Chulun Zhou , Jiebo Luo

A graph is strongly even-cycle decomposable if the edge set of every subdivision with an even number of edges can be partitioned into cycles of even length. We prove that several fundamental composition operations that preserve the property…

Combinatorics · Mathematics 2016-12-28 Tony Huynh , Andrew D. King , Sang-il Oum , Maryam Verdian-Rizi

Complex networks or graphs are ubiquitous in sciences and engineering: biological networks, brain networks, transportation networks, social networks, and the World Wide Web, to name a few. Spectral graph theory provides a set of useful…

Statistics Theory · Mathematics 2019-01-23 Subhadeep Mukhopadhyay , Kaijun Wang

Configurations are necklaces with prescribed numbers of red and black beads. Among all possible configurations, the regular one plays an important role in many applications. In this paper, several aspects of regular configurations are…

Combinatorics · Mathematics 2007-10-02 Taoyang Wu

Many real life networks present an average path length logarithmic with the number of nodes and a degree distribution which follows a power law. Often these networks have also a modular and self-similar structure and, in some cases -…

Physics and Society · Physics 2010-02-17 Alicia Miralles , Francesc Comellas , Lichao Chen , Zhongzhi Zhang

Attention networks have proven to be an effective approach for embedding categorical inference within a deep neural network. However, for many tasks we may want to model richer structural dependencies without abandoning end-to-end training.…

Computation and Language · Computer Science 2017-02-17 Yoon Kim , Carl Denton , Luong Hoang , Alexander M. Rush

The concept of nestedness, in particular for ecological and economical networks, has been introduced as a structural characteristic of real interacting systems. We suggest that the nestedness is in fact another way to express a mesoscale…

Physics and Society · Physics 2016-02-22 Sang Hoon Lee

This paper presents a nested tracking framework for analyzing cycles in 2D force networks within granular materials. These materials are composed of interacting particles, whose interactions are described by a force network. Understanding…

Graphics · Computer Science 2024-09-11 Farhan Rasheed , Abrar Naseer , Emma Nilsson , Talha Bin Masood , Ingrid Hotz

We show that graphs, networks and other related discrete model systems carry a natural supersymmetric structure, which, apart from its conceptual importance as to possible physical applications, allows to derive a series of spectral…

Mathematical Physics · Physics 2011-07-19 Manfred Requardt

Graph are a ubiquitous data representation, as they represent a flexible and compact representation. For instance, the 3D structure of RNA can be efficiently represented as $\textit{2.5D graphs}$, graphs whose nodes are nucleotides and…

Machine Learning · Computer Science 2021-09-21 Vincent Mallet , Carlos G. Oliver , William L. Hamilton

We propose and study a hierarchical algorithm to generate graphs having a predetermined distribution of cliques, the fully connected subgraphs. The construction mechanism may be either random or incorporate preferential attachment. We…

Physics and Society · Physics 2009-11-13 Gregor Kaczor , Claudius Gros