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While network science has become an indispensable tool for studying complex systems, the conventional use of pairwise links often shows limitations in describing high-order interactions properly. Hypergraphs, where each edge can connect…

Physics and Society · Physics 2024-12-20 Zhao Li , Jing Zhang , Jiqiang Zhang , Guozhong Zheng , Weiran Cai , Li Chen

We examine a variant of hypergraphs that we call interfaced linear hypergraphs, with the aim of creating a sound and complete graphical language for symmetric traced monoidal categories (STMCs) suitable for graph rewriting. In particular,…

Category Theory · Mathematics 2021-03-22 George Kaye

In this paper, we develop a generalized Bayesian inference framework for a collection of signal-plus-noise matrix models arising in high-dimensional statistics and many applications. The framework is built upon an asymptotically unbiased…

Statistics Theory · Mathematics 2022-04-01 Fangzheng Xie , Dingbo Wu

The effect of bias on hypothesis formation is characterized for an automated data-driven projection pursuit neural network to extract and select features for binary classification of data streams. This intelligent exploratory process…

Machine Learning · Computer Science 2022-01-05 John Patterson , Chris Avery , Tyler Grear , Donald J. Jacobs

Deep Neural Networks can generalize despite being significantly overparametrized. Recent research has tried to examine this phenomenon from various view points and to provide bounds on the generalization error or measures predictive of the…

Machine Learning · Computer Science 2020-12-07 Parth Natekar , Manik Sharma

We develop a cohomological description of various explicit descents in terms of generalized Jacobians, generalizing the known description for hyperelliptic curves. Specifically, given an integer $n$ dividing the degree of some reduced…

Number Theory · Mathematics 2019-09-23 Brendan Creutz

The richness of many complex systems stems from the interactions among their components. The higher-order nature of these interactions, involving many units at once, and their temporal dynamics constitute crucial properties that shape the…

Physics and Society · Physics 2024-07-29 Marco Mancastroppa , Iacopo Iacopini , Giovanni Petri , Alain Barrat

Normalizing flows have emerged as an important family of deep neural networks for modelling complex probability distributions. In this note, we revisit their coupling and autoregressive transformation layers as probabilistic graphical…

Machine Learning · Computer Science 2020-06-05 Antoine Wehenkel , Gilles Louppe

The mathematical formalisms used to model biological systems induce both latent and ambiguous assumptions that can limit or distort their representational capabilities. Developing formalisms that can represent systems more precisely is…

Quantitative Methods · Quantitative Biology 2026-05-25 Léo Diaz , Sean T. Vittadello , Michael P. H. Stumpf

In this paper, we consider diagonal hyperbolic systems with monotone continuous initial data. We propose a natural semi-explicit and upwind first order scheme. Under a certain non-negativity condition on the Jacobian matrix of the…

Numerical Analysis · Mathematics 2016-12-01 Laurent Monasse , Régis Monneau

Evolutionary dynamics is often viewed as a subtle process of change accumulation that causes a divergence among organisms and their genomes. However, this interpretation is an inheritance of a gradualistic view that has been challenged at…

Populations and Evolution · Quantitative Biology 2018-07-27 Jacobo Aguirre , Pablo Catalán , José A. Cuesta , Susanna Manrubia

We investigate the non-trivial informational closure (NTIC) of a Bayesian hyperparameter inferring the underlying distribution of an identically and independently distributed finite random variable. For this we embed both the Bayesian…

Machine Learning · Computer Science 2020-10-06 Martin Biehl , Ryota Kanai

The densities of small linear structures (such as arithmetic progressions) in subsets of Abelian groups can be expressed as certain analytic averages involving linear forms. Higher-order Fourier analysis examines such averages by…

Number Theory · Mathematics 2014-05-09 Hamed Hatami , Pooya Hatami , Shachar Lovett

In many domains, we are interested in analyzing the structure of the underlying distribution, e.g., whether one variable is a direct parent of the other. Bayesian model-selection attempts to find the MAP model and use its structure to…

Machine Learning · Computer Science 2013-01-18 Nir Friedman , Daphne Koller

We give a general method of constructing positive stable model structures for symmetric spectra over an abstract simplicial symmetric monoidal model category. The method is based on systematic localization, in Hirschhorn's sense, of a…

Algebraic Topology · Mathematics 2015-05-12 Sergey Gorchinskiy , Vladimir Guletskii

Good generative models should not only synthesize high quality data, but also utilize interpretable representations that aid human understanding of their behavior. However, it is difficult to measure objectively if and to what degree…

Machine Learning · Computer Science 2025-04-09 Daniel Galperin , Ullrich Köthe

We consider a generalization of the Hopfield model, where the entries of patterns are Gaussian and diluted. We focus on the high-storage regime and we investigate analytically the topological properties of the emergent network, as well as…

Disordered Systems and Neural Networks · Physics 2012-09-28 Elena Agliari , Lorenzo Asti , Adriano Barra , Raffaella Burioni , Guido Uguzzoni

Bayesian methods for learning Gaussian graphical models offer a principled framework for quantifying model uncertainty and incorporating prior knowledge. However, their scalability is constrained by the computational cost of jointly…

Methodology · Statistics 2025-08-28 Reza Mohammadi , Marit Schoonhoven , Lucas Vogels , S. Ilker Birbil

In a previous publication, we introduced an abstract logic via an abstract notion of quantifier. Drawing upon concepts from categorical logic, this abstract logic interprets formulas from context as subobjects in a specific category, e.g.,…

Logic in Computer Science · Computer Science 2024-07-08 Marc Aiguier , Isabelle Bloch , Romain Pascual

The notion of homomorphism indistinguishability offers a combinatorial framework for characterizing equivalence relations of graphs, in particular equivalences in counting logics within finite model theory. That is, for certain graph…

Logic in Computer Science · Computer Science 2025-06-26 Georg Schindling