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Bille and G{\o}rtz (2011) recently introduced the problem of substring range counting, for which we are asked to store compactly a string $S$ of $n$ characters with integer labels in ([0, u]), such that later, given an interval ([a, b]) and…

Data Structures and Algorithms · Computer Science 2012-02-16 Travis Gagie , Paweł Gawrychowski

Let $\D = $$ \{d_1,d_2,...d_D\}$ be a given set of $D$ string documents of total length $n$, our task is to index $\D$, such that the $k$ most relevant documents for an online query pattern $P$ of length $p$ can be retrieved efficiently. We…

Data Structures and Algorithms · Computer Science 2012-04-03 Wing-Kai Hon , Rahul Shah , Sharma V. Thankachan

This paper investigates the size in bits of the LZ77 encoding, which is the most popular and efficient variant of the Lempel-Ziv encodings used in data compression. We prove that, for a wide natural class of variable-length encoders for…

Discrete Mathematics · Computer Science 2018-01-10 Dmitry Kosolobov

The representation of a dynamic ordered set of $n$ integer keys drawn from a universe of size $m$ is a fundamental data structuring problem. Many solutions to this problem achieve optimal time but take polynomial space, therefore preserving…

Data Structures and Algorithms · Computer Science 2020-03-27 Giulio Ermanno Pibiri , Rossano Venturini

We consider the problem of storing a dynamic string $S$ over an alphabet $\Sigma=\{\,1,\ldots,\sigma\,\}$ in compressed form. Our representation supports insertions and deletions of symbols and answers three fundamental queries:…

Data Structures and Algorithms · Computer Science 2015-07-27 J. Ian Munro , Yakov Nekrich

Explorable heap selection is the problem of selecting the $n$th smallest value in a binary heap. The key values can only be accessed by traversing through the underlying infinite binary tree, and the complexity of the algorithm is measured…

Data Structures and Algorithms · Computer Science 2024-09-12 Sander Borst , Daniel Dadush , Sophie Huiberts , Danish Kashaev

Shannon's entropy is a clear lower bound for statistical compression. The situation is not so well understood for dictionary-based compression. A plausible lower bound is $b$, the least number of phrases of a general bidirectional parse of…

Data Structures and Algorithms · Computer Science 2019-10-29 Gonzalo Navarro , Carlos Ochoa , Nicola Prezza

Given a string $T$ of length $n$ over an alphabet $\Sigma\subset \{1,2,\ldots,n^{O(1)}\}$ of size $\sigma$, we are to preprocess $T$ so that given a range $[i,j]$, we can return a representation of a shortest string over $\Sigma$ that is…

Data Structures and Algorithms · Computer Science 2021-06-04 Golnaz Badkobeh , Panagiotis Charalampopoulos , Dmitry Kosolobov , Solon P. Pissis

We develop dynamic dictionaries on the word RAM that use asymptotically optimal space, up to constant factors, subject to insertions and deletions, and subject to supporting perfect-hashing queries and/or membership queries, each operation…

Data Structures and Algorithms · Computer Science 2007-05-23 Erik D. Demaine , Friedhelm Meyer auf der Heide , Rasmus Pagh , Mihai Patrascu

It is shown that for a given ordered node-labelled tree of size $n$ and with $s$ many different node labels, one can construct in linear time a top dag of height $O(\log n)$ and size $O(n / \log_\sigma n) \cap O(d \cdot \log n)$, where…

Data Structures and Algorithms · Computer Science 2017-12-19 Markus Lohrey , Carl Philipp Reh , Kurt Sieber

Given a set $S$ of $n$ (distinct) keys from key space $[U]$, each associated with a value from $\Sigma$, the \emph{static dictionary} problem asks to preprocess these (key, value) pairs into a data structure, supporting value-retrieval…

Data Structures and Algorithms · Computer Science 2020-09-01 Huacheng Yu

We present a simple and provably optimal non-adaptive cell probe data structure for the static dictionary problem. Our data structure supports storing a set of n key-value pairs from [u]x[u] using s words of space and answering key lookup…

Data Structures and Algorithms · Computer Science 2024-04-22 Kasper Green Larsen , Rasmus Pagh , Giuseppe Persiano , Toniann Pitassi , Kevin Yeo , Or Zamir

Suppose an oracle knows a string $S$ that is unknown to us and that we want to determine. The oracle can answer queries of the form "Is $s$ a substring of $S$?". In 1995, Skiena and Sundaram showed that, in the worst case, any algorithm…

Data Structures and Algorithms · Computer Science 2021-10-20 Gabriele Fici , Nicola Prezza , Rossano Venturini

In today's data-centric world, fast and effective compression of data is paramount. To measure success towards the second goal, Kempa and Prezza [STOC2018] introduce the string attractor, a combinatorial object unifying dictionary-based…

Data Structures and Algorithms · Computer Science 2024-07-23 Philip Whittington

Binary jumbled pattern matching asks to preprocess a binary string $S$ in order to answer queries $(i,j)$ which ask for a substring of $S$ that is of length $i$ and has exactly $j$ 1-bits. This problem naturally generalizes to…

Data Structures and Algorithms · Computer Science 2014-07-01 Travis Gagie , Danny Hermelin , Gad M. Landau , Oren Weimann

We introduce exponential search trees as a novel technique for converting static polynomial space search structures for ordered sets into fully-dynamic linear space data structures. This leads to an optimal bound of O(sqrt(log n/loglog n))…

Data Structures and Algorithms · Computer Science 2007-05-23 Arne Andersson , Mikkel Thorup

A longest repeat query on a string, motivated by its applications in many subfields including computational biology, asks for the longest repetitive substring(s) covering a particular string position (point query). In this paper, we extend…

Data Structures and Algorithms · Computer Science 2015-11-10 Bojian Xu

Encoding data structures store enough information to answer the queries they are meant to support but not enough to recover their underlying datasets. In this paper we give the first encoding data structure for the challenging problem of…

Data Structures and Algorithms · Computer Science 2017-02-21 Travis Gagie , Giovanni Manzini , Rossano Venturini

We introduce a compressed suffix array representation that, on a text $T$ of length $n$ over an alphabet of size $\sigma$, can be built in $O(n)$ deterministic time, within $O(n\log\sigma)$ bits of working space, and counts the number of…

Data Structures and Algorithms · Computer Science 2017-09-05 J. Ian Munro , Gonzalo Navarro , Yakov Nekrich

We present an algorithm that constructs the LZ-End parsing (a variation of LZ77) of a given string of length $n$ in $O(n\log\ell)$ expected time and $O(z + \ell)$ space, where $z$ is the number of phrases in the parsing and $\ell$ is the…

Data Structures and Algorithms · Computer Science 2020-12-15 Dominik Kempa , Dmitry Kosolobov