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This paper is dedicated to the R package FMM which implements a novel approach to describe rhythmic patterns in oscillatory signals. The frequency modulated M\"obius (FMM) model is defined as a parametric signal plus a gaussian noise, where…

Computation · Statistics 2022-09-07 I. Fernández , A. Rodríguez-Collado , Y. Larriba , A. Lamela , C. Canedo , C. Rueda

Mixture cure models have been widely used to analyze survival data with a cure fraction. They assume that a subgroup of the individuals under study will never experience the event (cured subjects). So, the goal is twofold: to study both the…

Methodology · Statistics 2024-02-01 Ana López-Cheda , M. Amalia Jácome , Ignacio López-de-Ullibarri

Dyadic data on pairs of objects, such as relational or social network data, often exhibit strong statistical dependencies. Certain types of second-order dependencies, such as degree heterogeneity and reciprocity, can be well-represented…

Computation · Statistics 2015-06-30 Peter D. Hoff

The greed package implements the general and flexible framework of arXiv:2002.11577 for model-based clustering in the R language. Based on the direct maximization of the exact Integrated Classification Likelihood with respect to the…

Methodology · Statistics 2022-05-02 Etienne Côme , Nicolas Jouvin

For randomized controlled trials (RCTs) with a single intervention being measured on multiple outcomes, researchers often apply a multiple testing procedure (such as Bonferroni or Benjamini-Hochberg) to adjust $p$-values. Such an adjustment…

Methodology · Statistics 2023-05-17 Kristen Hunter , Luke Miratrix , Kristin Porter

Additive models enjoy the flexibility of nonlinear models while still being readily understandable to humans. By contrast, other nonlinear models, which involve interactions between features, are not only harder to fit but also…

Methodology · Statistics 2025-06-03 Yiling Huang , Snigdha Panigrahi , Guo Yu , Jacob Bien

Machine learning decision systems are getting omnipresent in our lives. From dating apps to rating loan seekers, algorithms affect both our well-being and future. Typically, however, these systems are not infallible. Moreover, complex…

Machine Learning · Statistics 2022-02-15 Jakub Wiśniewski , Przemysław Biecek

In modern computer experiment applications, one often encounters the situation where various models of a physical system are considered, each implemented as a simulator on a computer. An important question in such a setting is determining…

Methodology · Statistics 2023-05-08 John C. Yannotty , Thomas J. Santner , Richard J. Furnstahl , Matthew T. Pratola

This paper develops an R package rMultiNet to analyze multilayer network data. We provide two general frameworks from recent literature, e.g. mixture multilayer stochastic block model(MMSBM) and mixture multilayer latent space model(MMLSM)…

Machine Learning · Statistics 2023-02-10 Ting Li , Zhongyuan Lyu , Chenyu Ren , Dong Xia

This article explains the usage of R package CausalModels, which is publicly available on the Comprehensive R Archive Network. While packages are available for sufficiently estimating causal effects, there lacks a package that provides a…

Methodology · Statistics 2023-07-19 Joshua Wolff Anderson , Cyril Rakovski

While there is significant interest in using generative AI tools as general-purpose models for specific ML applications, discriminative models are much more widely deployed currently. One of the key shortcomings of these discriminative AI…

Artificial Intelligence · Computer Science 2023-12-13 Son The Nguyen , Theja Tulabandhula , Mary Beth Watson-Manheim

Finite mixture models are statistical models which appear in many problems in statistics and machine learning. In such models it is assumed that data are drawn from random probability measures, called mixture components, which are…

Machine Learning · Statistics 2022-04-05 Robert A. Vandermeulen , Clayton D. Scott

Mixture models provide a flexible representation of heterogeneity in a finite number of latent classes. From the Bayesian point of view, Markov Chain Monte Carlo methods provide a way to draw inferences from these models. In particular,…

Methodology · Statistics 2020-05-06 Carolina Valani Cavalcante , Kelly Cristina Mota Gonçalves

The R package MixMashNet provides an integrated framework for estimating and analyzing single and multilayer networks using Mixed Graphical Models (MGMs), accommodating continuous, count, and categorical variables. In the multilayer…

Mixtures of experts models provide a framework in which covariates may be included in mixture models. This is achieved by modelling the parameters of the mixture model as functions of the concomitant covariates. Given their mixture model…

Methodology · Statistics 2018-06-22 Isobel Claire Gormley , Sylvia Frühwirth-Schnatter

For exchangeable data, mixture models are an extremely useful tool for density estimation due to their attractive balance between smoothness and flexibility. When additional covariate information is present, mixture models can be extended…

Methodology · Statistics 2023-08-01 Sara Wade , Vanda Inacio , Sonia Petrone

1. Accurate estimates of demographic parameters are required to infer appropriate ecological relationships and inform management actions. Recently developed N-mixture models use count data from unmarked individuals to estimate demographic…

Quantitative Methods · Quantitative Biology 2015-12-29 Joshua H. Schmidt , Devin S. Johnson , Mark S. Lindberg , Layne G. Adams

We present vivid, an R package for visualizing variable importance and variable interactions in machine learning models. The package provides a range of displays including heatmap and graph-based displays for viewing variable importance and…

Computation · Statistics 2024-10-15 Alan Inglis , Andrew Parnell , Catherine Hurley

The cgam package contains routines to fit the generalized additive model where the components may be modeled with shape and smoothness assumptions. The main routine is cgam and nineteen symbolic routines are provided to indicate the…

Applications · Statistics 2018-12-20 Xiyue Liao , Mary C. Meyer

We introduce an \verb|R| package, called \verb|MPS|, for computing the probability density function, computing the cumulative distribution function, computing the quantile function, simulating random variables, and estimating the parameters…

Computation · Statistics 2018-09-11 Mahdi Teimouri