Related papers: Phase-space dynamics of minimal Canham-Helfrich ce…
A quantum phase space with Wannier basis is constructed: (i) classical phase space is divided into Planck cells; (ii) a complete set of Wannier functions are constructed with the combination of Kohn's method and L\"owdin method such that…
We examine the dynamic and geometric phases of the electron in quantum mechanics using Hestenes' spacetime algebra formalism. First the standard dynamic phase formula is translated into the spacetime algebra. We then define new formulas for…
Modeling membrane interactions with arbitrarily shaped colloidal particles, such as environmental micro- and nanoplastics, at the cell scale remains particularly challenging, owing to the complexity of particle geometries and the need to…
We present a Lagrangian-Hamiltonian formalism of a moving dielectric sphere interacting with radiation fields. By including the interaction up to the first order in the speed of the sphere, we derive the Hamiltonian and perform quantization…
We derive a new effective macroscopic Cahn-Hilliard equation whose homogeneous free energy is represented by 4-th order polynomials, which form the frequently applied double-well potential. This upscaling is done for perforated/strongly…
In this work, we investigate the cosmological dynamics of the $f(R, \mathcal{L}_m)$ gravity framework with a particular focus on the contributions of the scalar field. Considering a functional form that includes linear and exponential…
We consider a relativistic extended object described by a reparametrization invariant local action that depends on the extrinsic curvature of the worldvolume swept out by the object as it evolves. We provide a Hamiltonian formulation of the…
We introduce a formalism for the geometry of eukaryotic cells and organisms.Cells are taken to be star-convex with good biological reason. This allows for a convenient description of their extent in space as well as all manner of cell…
In this study, we use the cell dynamics method to test the validity of the Kormogorov-Johnson-Mehl-Avrami (KJMA) theory of phase transformation. This cell dynamics method is similar to the well-known phase-field model, but it is a more…
The analysis of the dynamics of a material point perfectly constrained to a submanifold of the three-dimensional euclidean space and subjected to a locally conservative force's field, namely a force's field corresponding to a closed but not…
How many canonical degrees of freedom does a quantum field theory actually use during its Hamiltonian evolution? For a UV/IR-regularised classical scalar field, we address this question directly at the level of phase-space dynamics by…
Phase space structures such as dividing surfaces, normally hyperbolic invariant manifolds, their stable and unstable manifolds have been an integral part of computing quantitative results such as transition fraction, stability erosion in…
The deformation of cellular membranes regulates trafficking processes, such as exocytosis and endocytosis. Classically, the Helfrich continuum model is used to characterize the forces and mechanical parameters that cells tune to accomplish…
A variational method is used to derive a self-consistent macro-particle model for relativistic electromagnetic kinetic plasma simulations. Extending earlier work [E. G. Evstatiev and B. A. Shadwick, J. Comput. Phys., vol. 245, pp. 376-398,…
A variational phase space is constructed for a compact and piecewise flat Riemannian manifold. An extended action functional is provided such that the variational dynamics generate a symplectic flow on the phase space. This symplectic flow…
The interface dynamics of a 3D cell immersed in a 3D extracellular matrix is investigated. We suggest a 3D generalization of a known 2D minimal phase field model suggested in [1] for the description of keratocyte motility. Our model…
We apply the Dirac procedure for constrained systems to the Arnowitt-Deser-Misner formalism linearized around the Friedmann-Lemaitre universe. We explain and employ some basic concepts such as Dirac observables, Dirac brackets, gauge-fixing…
The interplay between off-shell and on-shell unfolded systems is analysed. The formulation of invariant constraints that put an off-shell system on shell is developed by adding new variables and derivation in the target space, that extends…
We present an energy-preserving mechanic formulation for dynamic quasi-brittle fracture in an Eulerian-Lagrangian formulation, where a second-order phase-field equation controls the damage evolution. The numerical formulation adapts in…
In Continuum Mechanic a simple material body $\mathcal{B}$ is represeted by a three-dimensional differentiable manifold and the configuration space is given by the space of embeddings $Emb \left( \mathcal{B} , \mathbb{R}^{n} \right)$. We…