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The maximum clique problem is a well known NP-Hard problem with applications in data mining, network analysis, informatics, and many other areas. Although there exist several algorithms with acceptable runtimes for certain classes of…
A \emph{clique} is a set of pairwise adjacent vertices in a graph. We determine the maximum number of cliques in a graph for the following graph classes: (1) graphs with $n$ vertices and $m$ edges; (2) graphs with $n$ vertices, $m$ edges,…
Large Language Models (LLMs) have shown remarkable capabilities in processing various data structures, including graphs. While previous research has focused on developing textual encoding methods for graph representation, the emergence of…
We introduce a new concept of a subgraph class called a superbubble for analyzing assembly graphs, and propose an efficient algorithm for detecting it. Most assembly algorithms utilize assembly graphs like the de Bruijn graph or the overlap…
A graph homomorphism is a map between two graphs that preserves adjacency relations. We consider the problem of sampling a random graph homomorphism from a graph into a large network. We propose two complementary MCMC algorithms for…
Graphlets are induced subgraphs of a large network and are important for understanding and modeling complex networks. Despite their practical importance, graphlets have been severely limited to applications and domains with relatively small…
Many complex engineering systems can be represented in a topological form, such as graphs. This paper utilizes a machine learning technique called Geometric Deep Learning (GDL) to aid designers with challenging, graph-centric design…
We consider the problem of finding a large clique in an Erd\H{o}s--R\'enyi random graph where we are allowed unbounded computational time but can only query a limited number of edges. Recall that the largest clique in $G \sim G(n,1/2)$ has…
The Bradley-Terry-Luce (BTL) model is one of the most widely used models for ranking a collection of items or agents based on pairwise comparisons among them. Given $n$ agents, the BTL model endows each agent $i$ with a latent skill score…
In this paper, we relate the problem of finding a maximum clique to the intersection number of the input graph (i.e. the minimum number of cliques needed to edge cover the graph). In particular, we consider the maximum clique problem for…
The study of complex networks has significantly advanced our understanding of community structures which serves as a crucial feature of real-world graphs. Detecting communities in graphs is a challenging problem with applications in…
Clustering algorithms for large networks typically use modularity values to test which partitions of the vertex set better represent structure in the data. The modularity of a graph is the maximum modularity of a partition. We consider the…
We address the problem of constructing large undirected circulant networks with given degree and diameter. First we discuss the theoretical upper bounds and their asymptotics, and then we describe and implement a computer-based method to…
Graphs are nowadays ubiquitous in the fields of signal processing and machine learning. As a tool used to express relationships between objects, graphs can be deployed to various ends: I) clustering of vertices, II) semi-supervised…
We determine new upper bounds for the clique numbers of strongly regular graphs in terms of their parameters. These bounds improve on the Delsarte bound for infinitely many feasible parameter tuples for strongly regular graphs, including…
Graphs are versatile tools for representing structured data. As a result, a variety of machine learning methods have been studied for graph data analysis. Although many such learning methods depend on the measurement of differences between…
The degree-diameter problem seeks to find the largest possible number of vertices in a graph having given diameter and given maximum degree. Very often the problem is studied for restricted families of graph such as vertex-transitive or…
Motivated by an approach to visualization of high dimensional statistical data given in Hurley and Oldford (2011), this work examines the clique structure of $J_n(m, m-1)$ Johnson graphs. Cliques and maximal cliques are characterized and…
Graph connection Laplacian (GCL) is a modern data analysis technique that is starting to be applied for the analysis of high dimensional and massive datasets. Motivated by this technique, we study matrices that are akin to the ones…
Sampling is a standard approach in big-graph analytics; the goal is to efficiently estimate the graph properties by consulting a sample of the whole population. A perfect sample is assumed to mirror every property of the whole population.…