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The importance of variable selection for clustering has been recognized for some time, and mixture models are well-established as a statistical approach to clustering. Yet, the literature on variable selection in model-based clustering…

Methodology · Statistics 2024-02-13 Mackenzie R. Neal , Paul D. McNicholas

We introduce varbvs, a suite of functions written in R and MATLAB for regression analysis of large-scale data sets using Bayesian variable selection methods. We have developed numerical optimization algorithms based on variational…

Computation · Statistics 2017-09-21 Peter Carbonetto , Xiang Zhou , Matthew Stephens

The package mvlearnR and accompanying Shiny App is intended for integrating data from multiple sources or views or modalities (e.g. genomics, proteomics, clinical and demographic data). Most existing software packages for multiview learning…

Genomics · Quantitative Biology 2023-11-29 Elise F. Palzer , Sandra E. Safo

We introduce an R package, PCMBase, to rapidly calculate the likelihood for multivariate phylogenetic comparative methods. The package is not specific to particular models but offers the user the functionality to very easily implement a…

Populations and Evolution · Quantitative Biology 2019-12-13 Venelin Mitov , Krzysztof Bartoszek , Georgios Asimomitis , Tanja Stadler

The matrixdist R package provides a comprehensive suite of tools for the statistical analysis of matrix distributions, including phase-type, inhomogeneous phase-type, discrete phase-type, and related multivariate distributions. This paper…

Computation · Statistics 2025-03-11 Martin Bladt , Alaric Mueller , Jorge Yslas

Model-based clustering is a popular approach for clustering multivariate data which has seen applications in numerous fields. Nowadays, high-dimensional data are more and more common and the model-based clustering approach has adapted to…

Methodology · Statistics 2018-09-25 Michael Fop , Thomas Brendan Murphy

This paper explores an innovative approach to teaching data wrangling skills to students through hands-on activities before transitioning to coding. Data wrangling, a critical aspect of data analysis, involves cleaning, transforming, and…

Human-Computer Interaction · Computer Science 2025-03-24 Lucy D'Agostino McGowan

The rebmix package provides R functions for random univariate and multivariate finite mixture model generation, estimation, clustering and classification. The paper is focused on multivariate normal mixture models with unrestricted…

Machine Learning · Statistics 2018-01-29 Marko Nagode

Mixed data arise when observations are described by a mixture of numerical and categorical variables. The R package PCAmixdata extends to this type of data standard multivariate analysis methods which allow description, exploration and…

Computation · Statistics 2022-10-25 Marie Chavent , Vanessa Kuentz-Simonet , Amaury Labenne , Jérôme Saracco

\pkg{multiplex} is a computer program that provides algebraic tools for the analysis of multiple network structures within the \proglang{R} environment. Apart from the possibility to create and manipulate multivariate data representing…

Social and Information Networks · Computer Science 2022-01-31 J Antonio Rivero Ostoic

Visual Analytics (VA) tools and techniques have been instrumental in supporting users to build better classification models, interpret models' overall logic, and audit results. In a different direction, VA has recently been applied to…

Machine Learning · Computer Science 2022-11-21 Mário Popolin Neto , Fernando V. Paulovich

The R package bsvars provides a wide range of tools for empirical macroeconomic and financial analyses using Bayesian Structural Vector Autoregressions. It uses frontier econometric techniques and C++ code to ensure fast and efficient…

Econometrics · Economics 2025-04-17 Tomasz Woźniak

Recent advances in big data and analytics research have provided a wealth of large data sets that are too big to be analyzed in their entirety, due to restrictions on computer memory or storage size. New Bayesian methods have been developed…

Applications · Statistics 2014-09-30 Alexey Miroshnikov , Erin Conlon

Software vulnerabilities (SVs) pose a critical threat to safety-critical systems, driving the adoption of AI-based approaches such as machine learning and deep learning for software vulnerability detection. Despite promising results, most…

Cryptography and Security · Computer Science 2025-10-07 Van Nguyen , Surya Nepal , Xingliang Yuan , Tingmin Wu , Fengchao Chen , Carsten Rudolph

Multivariate spatial data plays an important role in computational science and engineering simulations. The potential features and hidden relationships in multivariate data can assist scientists to gain an in-depth understanding of a…

Human-Computer Interaction · Computer Science 2019-08-30 Xiangyang He , Yubo Tao , Qirui Wang , Hai Lin

In this short article I introduce the mvp package, which provides some functionality for handling multivariate polynomials. The package uses the C++ Standard Template Library's map class to store and retrieve elements; it conforms to…

Symbolic Computation · Computer Science 2022-10-31 Robin K. S. Hankin

In the present work we have selected a collection of statistical and mathematical tools useful for the exploration of multivariate data and we present them in a form that is meant to be particularly accessible to a classically trained…

Statistics Theory · Mathematics 2010-09-01 Magnus Fontes

Microarray technology is still an important way to assess gene expression in molecular biology, mainly because it measures expression profiles for thousands of genes simultaneously, what makes this technology a good option for some studies…

Computation · Statistics 2015-11-12 Gustavo H. Esteves , Roberto Hirata

There has been a tremendous methodological development of Bayes factors for hypothesis testing in the social and behavioral sciences, and related fields. This development is due to the flexibility of the Bayes factor for testing multiple…

Analyses of a software product line (SPL) typically report variable results that are annotated with logical expressions indicating the set of product variants for which the results hold. These expressions can get complicated and difficult…

Software Engineering · Computer Science 2023-11-01 Rafael F. Toledo , Joanne M. Atlee , Rui Ming Xiong