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We study compact straight-line embeddings of trees. We show that perfect binary trees can be embedded optimally: a tree with $n$ nodes can be drawn on a $\sqrt n$ by $\sqrt n$ grid. We also show that testing whether a given binary tree has…

Computational Geometry · Computer Science 2018-09-03 Hugo A. Akitaya , Maarten Löffler , Irene Parada

Certain families of combinatorial objects admit recursive descriptions in terms of generating trees: each node of the tree corresponds to an object, and the branch leading to the node encodes the choices made in the construction of the…

We propose a procedure to build a decision tree which approximates the performance of complex machine learning models. This single approximation tree can be used to interpret and simplify the predicting pattern of random forests (RFs) and…

Methodology · Statistics 2016-10-31 Yichen Zhou , Giles Hooker

We propose a novel architecture for Graph Neural Networks that is inspired by the idea behind Tree Kernels of measuring similarity between trees by taking into account their common substructures, named fragments. By imposing a series of…

Computation and Language · Computer Science 2021-10-04 Federico Ruggeri , Marco Lippi , Paolo Torroni

Nearest neighbor (kNN) methods have been gaining popularity in recent years in light of advances in hardware and efficiency of algorithms. There is a plethora of methods to choose from today, each with their own advantages and…

Machine Learning · Computer Science 2017-03-01 Daniel Zoran , Balaji Lakshminarayanan , Charles Blundell

This paper presents a tree-to-tree transduction method for sentence compression. Our model is based on synchronous tree substitution grammar, a formalism that allows local distortion of the tree topology and can thus naturally capture…

Computation and Language · Computer Science 2014-01-23 Trevor Anthony Cohn , Mirella Lapata

Trees or rooted trees have been generously studied in the literature. A forest is a set of trees or rooted trees. Here we give recurrence relations between the number of some kind of rooted forest with $k$ roots and that with $k+1$ roots on…

Combinatorics · Mathematics 2017-02-08 Song Guo , Victor J. W. Guo

When considering the number of subtrees of trees, the extremal structures which maximize this number among binary trees and trees with a given maximum degree lead to some interesting facts that correlate to other graphical indices in…

Combinatorics · Mathematics 2012-10-11 Xiu-Mei Zhang , Xiao-Dong Zhang , Daniel Gray , Hua Wang

We study the complexity and expressive power of conjunctive queries over unranked labeled trees represented using a variety of structure relations such as ``child'', ``descendant'', and ``following'' as well as unary relations for node…

Databases · Computer Science 2007-05-23 Georg Gottlob , Christoph Koch , Klaus U. Schulz

The Neighbor-Joining algorithm is a popular distance-based phylogenetic method that computes a tree metric from a dissimilarity map arising from biological data. Realizing dissimilarity maps as points in Euclidean space, the algorithm…

Combinatorics · Mathematics 2020-09-18 Ruth Davidson , Abraham Martin del Campo

We study an abstract notion of tree structure which lies at the common core of various tree-like discrete structures commonly used in combinatorics: trees in graphs, order trees, nested subsets of a set, tree-decompositions of graphs and…

Combinatorics · Mathematics 2017-02-28 Reinhard Diestel

The subtrees and BC-subtrees (subtrees where any two leaves are at even distance apart) have been extensively studied in recent years. Such structures, under special constraints on degrees, have applications in many fields. Through an…

Combinatorics · Mathematics 2021-10-08 Yu Yang , Xiao-xiao Li , Meng-yuan Jin , Long Li , Hua Wang , Xiao-Dong Zhang

We construct the ordinary irreducible representations of the group of automorphisms of a finite rooted tree and we get a natural parametrization of them. To achieve this goals, we introduce and study the combinatorics of tree compositions,…

Representation Theory · Mathematics 2025-04-15 Fabio Scarabotti

The graph edit distance is used for comparing graphs in various domains. Due to its high computational complexity it is primarily approximated. Widely-used heuristics search for an optimal assignment of vertices based on the distance…

Data Structures and Algorithms · Computer Science 2023-12-08 Franka Bause , Christian Permann , Nils M. Kriege

We present approximation algorithms for the following NP-hard optimization problems related to bottleneck spanning trees in metric spaces. 1. The disjoint bottleneck spanning tree problem: Given $n$ pairs of points in a metric space, find…

Computational Geometry · Computer Science 2021-11-11 Ahmad Biniaz , Anil Maheshwari , Michiel Smid

We consider random binary trees that appear as the output of certain standard algorithms for sorting and searching if the input is random. We introduce the subtree size metric on search trees and show that the resulting metric spaces…

Probability · Mathematics 2014-05-06 Rudolf Grübel

The reconstruction of a central tendency `species tree' from a large number of conflicting gene trees is a central problem in systematic biology. Moreover, it becomes particularly problematic when taxon coverage is patchy, so that not all…

Populations and Evolution · Quantitative Biology 2014-05-27 Mike Steel , Joel D. Velasco

Aerial remote sensing using multispectral and RGB imagers has provided a critical impetus to precision agriculture. Analysis of the hyperspectral images with limited or no labels is challenging. This paper focuses on self-supervised…

Computer Vision and Pattern Recognition · Computer Science 2025-09-09 Moqsadur Rahman , Saurav Kumar , Santosh S. Palmate , M. Shahriar Hossain

We propose a principled method for autoencoding with random forests. Our strategy builds on foundational results from nonparametric statistics and spectral graph theory to learn a low-dimensional embedding of the model that optimally…

Machine Learning · Statistics 2026-01-16 Binh Duc Vu , Jan Kapar , Marvin Wright , David S. Watson

Neural Networks and Decision Trees: two popular techniques for supervised learning that are seemingly disconnected in their formulation and optimization method, have recently been combined in a single construct. The connection pivots on…

Machine Learning · Statistics 2020-02-27 Giuseppe Nuti , Lluís Antoni Jiménez Rugama , Kaspar Thommen