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A determinant property of the structure of a biological network is the distribution of local connectivity patterns, i.e., network motifs. In this work, a method for creating directed, unweighted networks while promoting a certain…

Social and Information Networks · Computer Science 2016-07-29 Tuomo Mäki-Marttunen

Detecting and visualizing what are the most relevant changes in an evolving network is an open challenge in several domains. We present a fast algorithm that filters subsets of the strongest nodes and edges representing an evolving weighted…

Social and Information Networks · Computer Science 2014-11-05 Przemyslaw A. Grabowicz , Luca Maria Aiello , Filippo Menczer

Communities are not static; they evolve, split and merge, appear and disappear, i.e. they are product of dynamical processes that govern the evolution of the network. A good algorithm for community detection should not only quantify the…

Physics and Society · Physics 2011-11-24 Angel Stanoev , Daniel Smilkov , Ljupco Kocarev

Dynamic evolving networks capture temporal relations in domains such as social networks, communication networks, and financial transaction networks. In such networks, temporal motifs, which are repeated sequences of time-stamped…

Social and Information Networks · Computer Science 2022-01-03 Alexandra Porter , Baharan Mirzasoleiman , Jure Leskovec

Motifs are the most repetitive/frequent patterns of a time-series. The discovery of motifs is crucial for practitioners in order to understand and interpret the phenomena occurring in sequential data. Currently, motifs are searched among…

Artificial Intelligence · Computer Science 2015-05-05 Josif Grabocka , Nicolas Schilling , Lars Schmidt-Thieme

A network provides powerful means of representing complex relationships between entities by abstracting entities as vertices, and relationships as edges connecting vertices in a graph. Beyond the presence or absence of relationships, a…

Social and Information Networks · Computer Science 2020-01-15 Isuru Udayangani Hewapathirana

Exploring statistics of locally connected subgraph patterns (also known as network motifs) has helped researchers better understand the structure and function of biological and online social networks (OSNs). Nowadays the massive size of…

Social and Information Networks · Computer Science 2014-03-28 Pinghui Wang , John C. S. Lui , Bruno Ribeiro , Don Towsley , Junzhou Zhao , Xiaohong Guan

This paper proposes a graph-based approach to representing spatio-temporal trajectory data that allows an effective visualization and characterization of city-wide traffic dynamics. With the advance of sensor, mobile, and Internet of Things…

Machine Learning · Computer Science 2022-12-07 Jiwon Kim , Kai Zheng , Jonathan Corcoran , Sanghyung Ahn , Marty Papamanolis

The occurrence of diffusion on a graph is a prevalent and significant phenomenon, as evidenced by the spread of rumors, influenza-like viruses, smart grid failures, and similar events. Comprehending the behaviors of flow is a formidable…

Social and Information Networks · Computer Science 2023-08-09 Zijian Zhang , Zonghan Zhang , Zhiqian Chen

There has been much research on network flows over time due to their important role in real world applications. This has led to many results, but the more challenging continuous time model still lacks some of the key concepts and techniques…

Systems and Control · Computer Science 2014-01-24 Ebrahim Nasrabadi , Ronald Koch

Visibility algorithms transform time series into graphs and encode dynamical information in their topology, paving the way for graph-theoretical time series analysis as well as building a bridge between nonlinear dynamics and network…

Data Analysis, Statistics and Probability · Physics 2016-05-11 Jacopo Iacovacci , Lucas Lacasa

Temporal graphs are structures which model relational data between entities that change over time. Due to the complex structure of data, mining statistically significant temporal subgraphs, also known as temporal motifs, is a challenging…

Social and Information Networks · Computer Science 2021-10-05 Antonio Longa , Giulia Cencetti , Bruno Lepri , Andrea Passerini

Sequence discovery tools play a central role in several fields of computational biology. In the framework of Transcription Factor binding studies, motif finding algorithms of increasingly high performance are required to process the big…

Quantitative Methods · Quantitative Biology 2014-08-27 Nicolò Colombo , Nikos Vlassis

Algorithms for mining very large graphs, such as those representing online social networks, to discover the relative frequency of small subgraphs within them are of high interest to sociologists, computer scientists and marketeers alike.…

Social and Information Networks · Computer Science 2017-06-16 Guyue Han , Harish Sethu

We are motivated by the fact that multiple representations of the environment are required to stand for the changes in appearance with time and for changes that appear in a cyclic manner. These changes are, for example, from day to night…

Computer Vision and Pattern Recognition · Computer Science 2018-08-02 A. H. Abdul Hafez , Nakul Agarwal , C. V. Jawahar

One fundamental problem in temporal graph analysis is to count the occurrences of small connected subgraph patterns (i.e., motifs), which benefits a broad range of real-world applications, such as anomaly detection, structure prediction,…

Machine Learning · Computer Science 2022-04-21 Zhongqiang Gao , Chuanqi Cheng , Yanwei Yu , Lei Cao , Chao Huang , Junyu Dong

The structure of complex networks can be characterized by counting and analyzing network motifs. Motifs are small subgraphs that occur repeatedly in a network, such as triangles or chains. Recent work has generalized motifs to temporal and…

Physics and Society · Physics 2022-01-04 Timothy LaRock , Ingo Scholtes , Tina Eliassi-Rad

Interaction networks are of central importance in post-genomic molecular biology, with increasing amounts of data becoming available by high-throughput methods. Examples are gene regulatory networks or protein interaction maps. The main…

Statistical Mechanics · Physics 2009-11-10 Johannes Berg , Michael Lässig

In complex systems, groups of interacting objects may form prevalent and persistent spatiotemporal patterns, which we refer to as motifs. These motifs can exhibit features that reveal how individual objects interact with one another.…

Biological Physics · Physics 2025-12-12 Ying Chen Lim , Rakesh Das , Tetsuya Hiraiwa , N. Duane Loh

Researchers, policy makers, and engineers need to make sense of data from spreading processes as diverse as rumor spreading in social networks, viral infections, and water contamination. Classical questions include predicting infection…

Data Structures and Algorithms · Computer Science 2026-01-08 Ben Bals , Michelle Döring , Nicolas Klodt , George Skretas