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We perform molecular-dynamics simulations of a molecular system in supercooled states for different values of inertia parameters to provide evidence that the long-time dynamics depends only on the equilibrium structure. This observation is…

Soft Condensed Matter · Physics 2009-11-10 S. -H. Chong , F. Sciortino

Atherosclerosis is a chronic inflammatory disease occurs due to plaque accumulation in the inner artery wall. In atherosclerotic plaque formation monocytes and macrophages play a significant role in controlling the disease dynamics. In the…

Dynamical Systems · Mathematics 2022-05-31 Debasmita Mukherjee , Sishu Shankar Muni , Hammed Olawale Fatoyinbo

Empirical diagnosis of stability has received considerable attention, mostly focused on variance metrics for early warning signals of abrupt system change. Despite this, the theoretical foundation and application has been limited to…

Adaptation and Self-Organizing Systems · Physics 2020-09-11 Zachary C Williams , Dylan E McNamara

Changes in environmental or system parameters often drive major biological transitions, including ecosystem collapse, disease outbreaks, and tumor development. Analyzing the stability of steady states in dynamical systems provides critical…

Populations and Evolution · Quantitative Biology 2025-05-02 Joseph Cummings , Kyle J. -M. Dahlin , Elizabeth Gross , Jonathan D. Hauenstein

Neural field equations are integro-differential systems describing the macroscopic activity of spatially extended pieces of cortex. In such cortical assemblies, the propagation of information and the transmission machinery induce…

Dynamical Systems · Mathematics 2014-02-05 Grégory Faye , Jonathan Touboul

Virtually every biological function emerges through the organization of molecules in time and space. Consequently, a major challenge in statistical physics is to uncover the universal principles governing macromolecular self-organization…

Statistical Mechanics · Physics 2026-03-16 E. Meyberg , J. F. Robinson , T. Speck

We study a simplified system of the original Ericksen--Leslie equations for the flow of nematic liquid crystals. This is a coupled non-parabolic dissipative dynamic system. We show the convergence of global classical solutions to single…

Analysis of PDEs · Mathematics 2010-11-04 Hao Wu

We derive a mode-coupling theory for the slow dynamics of fluids confined in disordered porous media represented by spherical particles randomly placed in space. Its equations display the usual nonlinear structure met in this theoretical…

Soft Condensed Matter · Physics 2007-05-23 V. Krakoviack

This work is devoted to examining qualitative properties of dynamic systems, in particular, limit cycles of stochastic differential equations with both rapid switching and small diffusion. The systems are featured by multi-scale…

Dynamical Systems · Mathematics 2017-07-20 Dang H. Nguyen , Nguyen H. Du , George Yin

Mechanical characteristics of single biological cells are used to identify and possibly leverage interesting differences among cells or cell populations. Fluidity---hysteresivity normalized to the extremes of an elastic solid or a viscous…

Cell Behavior · Quantitative Biology 2013-10-22 John M. Maloney , Eric Lehnhardt , Alexandra F. Long , Krystyn J. Van Vliet

In this article we discuss several aspects of the stochastic dynamics of spin models. The paper has two independent parts. Firstly, we explore a few properties of the multi-point correlations and responses of generic systems evolving in…

Statistical Mechanics · Physics 2009-11-10 Guilhem Semerjian , Leticia F. Cugliandolo , Andrea Montanari

Fractional derivative and delay are important tools in modeling memory properties in the natural system. This work deals with the stability analysis of a fractional order delay differential equation \begin{equation*} D^\alpha x(t)=\delta…

Dynamical Systems · Mathematics 2022-08-29 Sachin Bhalekar , Deepa Gupta

Networks of neural mass nodes with delayed interactions are increasingly being used as models for large-scale brain activity. To complement the growing number of computational studies of such networks, it is timely to develop new…

Dynamical Systems · Mathematics 2025-09-29 S Coombes , H G E Meijer

We introduce two time-delay models of metabolic oscillations in yeast cells. Our model tests a hypothesis that the oscillations occur as multiple pathways share a limited resource which we equate to the number of available ribosomes. We…

Dynamical Systems · Mathematics 2023-12-07 Max M. Chumley , Firas A. Khasawneh , Andreas Otto , Tomas Gedeon

We investigate the instability and stability of specific steady-state solutions of the two-dimensional non-homogeneous, incompressible, and viscous Navier-Stokes equations under the influence of a general potential $f$. This potential is…

Analysis of PDEs · Mathematics 2025-03-12 Liang Li , Tao Tan , Quan Wang

Many cell types exhibit oscillatory activity, such as repetitive action potential firing due to the Hodgkin-Huxley dynamics of ion channels in the cell membrane or reveal intracellular inositol triphosphate (IP$_3$) mediated calcium…

Cell Behavior · Quantitative Biology 2015-06-26 J. M. A. M. Kusters , J. M. Cortes , W. P. M. van Meerwijk , D. L. Ypey , A. P. R. Theuvenet , C. C. A. M. Gielen

The general Ericksen-Leslie system for the flow of nematic liquid crystals is reconsidered in the non-isothermal case aiming for thermodynamically consistent models. The non-isothermal model is then investigated analytically. A fairly…

Analysis of PDEs · Mathematics 2015-04-07 Matthias Hieber , Jan Pruess

The cooperative dynamics of cellular populations emerging from the underlying interactions determines cellular functions, and thereby their identity in tissues. Global deviations from this dynamics on the other hand reflects pathological…

Cell Behavior · Quantitative Biology 2020-02-19 Nataliya Stankevich , Aneta Koseska

Sleep is essential for the maintenance of the brain and the body, yet many features of sleep are poorly understood and mathematical models are an important tool for probing proposed biological mechanisms. The most well-known mathematical…

Neurons and Cognition · Quantitative Biology 2015-06-17 Anne C. Skeldon , Derk-Jan Dijk , Gianne Derks

Chaotic mixing in a closed vessel is studied experimentally and numerically in different 2-D flow configurations. For a purely hyperbolic phase space, it is well-known that concentration fluctuations converge to an eigenmode of the…