Related papers: Left-Right Pairs and Complex Forests of Infinite R…
Pairwise ordered tree alignment are combinatorial objects that appear in RNA secondary structure comparison. However, the usual representation of tree alignments as supertrees is ambiguous, i.e. two distinct supertrees may induce identical…
We show that every exceptional Lie algebra over a number field can be obtained by Tits' construction from an octonion algebra O and a cubic Jordan algebra J. In particular, the exceptional Lie algebra contains a dual pair which is the…
We study an abstract notion of tree structure which lies at the common core of various tree-like discrete structures commonly used in combinatorics: trees in graphs, order trees, nested subsets of a set, tree-decompositions of graphs and…
The {\sc Directed Maximum Leaf Out-Branching} problem is to find an out-branching (i.e. a rooted oriented spanning tree) in a given digraph with the maximum number of leaves. In this paper, we improve known parameterized algorithms and…
The Rooted Maximum Leaf Outbranching problem consists in finding a spanning directed tree rooted at some prescribed vertex of a digraph with the maximum number of leaves. Its parameterized version asks if there exists such a tree with at…
We study the random Fibonacci tree, which is an infinite binary tree with non-negative integers at each node. The root consists of the number 1 with a single child, also the number 1. We define the tree recursively in the following way: if…
We prove that for any finite tree $T$ with $n$ vertices and maximal degree $3$, there is a topological embedding of $T$ into the integer grid $Z^2$ which maps vertices to vertices and whose image meets at most $\frac{7}{3}n$ vertices. This…
A tree diagram is a tree with positive integral weight on each edge, which is a notion generalized from the Dynkin diagrams of finite-dimensional simple Lie algebras. We introduce two nilpotent Lie algebras and their extended solvable Lie…
Packing graphs is a combinatorial problem where several given graphs are being mapped into a common host graph such that every edge is used at most once. In the planar tree packing problem we are given two trees T1 and T2 on n vertices and…
A skew polynomial ring $R=K[x;\sigma,\delta]$ is a ring of polynomials with non-commutative multiplication. This creates a difference between left and right divisibility, and thus a concept of left and right evaluations and roots. A…
Binary relations derived from labeled rooted trees play an import role in mathematical biology as formal models of evolutionary relationships. The (symmetrized) Fitch relation formalizes xenology as the pairs of genes separated by at least…
We propose a new arithmetic for non-empty rooted unordered trees simply called trees. After discussing tree representation and enumeration, we define the operations of tree addition, multiplication and stretch, prove their properties, and…
We show that the class of finite rooted binary plane trees is a Ramsey class (with respect to topological embeddings that map leaves to leaves). That is, for all such trees P,H and every natural number k there exists a tree T such that for…
We show the theory of pointed $\R$-trees with radius at most $r$ is axiomatizable in a suitable continuous signature. We identify the model companion $\rbRT_r$ of this theory and study its properties. In particular, the model companion is…
Let $\Omega_n$ be the family of binary trees on $n$ vertices obtained by identifying the root of an rgood binary tree with a vertex of maximum eccentricity of a binary caterpillar. In the paper titled "On different middle parts of a tree…
Working with generating functions, the combinatorics of a recurrence relation can be expressed in a way that allows for more efficient calculation of the quantity. This is true of the Catalan numbers for an ordered binary tree…
In this article, we present a binary tree with vertices given by rational functions $p(x)/q(x)$; the root and functional derivation of children are inspired by continued fractions. We prove some special properties of the tree. For example,…
Plane increasing trees are rooted labeled trees embedded into the plane such that the sequence of labels is increasing on any branch starting at the root. Relaxed binary trees are a subclass of unlabeled directed acyclic graphs. We…
The tree theorem for pairs ($\mathsf{TT}^2_2$), first introduced by Chubb, Hirst, and McNicholl, asserts that given a finite coloring of pairs of comparable nodes in the full binary tree $2^{<\omega}$, there is a set of nodes isomorphic to…
Structural convergence is a framework for convergence of graphs by Ne\v{s}et\v{r}il and Ossona de Mendez that unifies the dense (left) graph convergence and Benjamini-Schramm convergence. They posed a problem asking whether for a given…