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A new deep neural network based on the WaveNet architecture (WNN) is presented, which is designed to grasp specific patterns in the NMR spectra. When trained at a fixed non-uniform sampling (NUS) schedule, the WNN benefits from pattern…

Biomolecules · Quantitative Biology 2022-12-05 Amir Jahangiri , Xiao Han , Dmitry Lesovoy , Tatiana Agback , Peter Agback , Adnane Achour , Vladislav Orekhov

Resting-state functional magnetic resonance imaging (rs-fMRI) is a noninvasive technique pivotal for understanding human neural mechanisms of intricate cognitive processes. Most rs-fMRI studies compute a single static functional…

Neurons and Cognition · Quantitative Biology 2025-02-25 Bishal Thapaliya , Robyn Miller , Jiayu Chen , Yu-Ping Wang , Esra Akbas , Ram Sapkota , Bhaskar Ray , Pranav Suresh , Santosh Ghimire , Vince Calhoun , Jingyu Liu

Machine Learning methods can learn how to reconstruct Magnetic Resonance Images and thereby accelerate acquisition, which is of paramount importance to the clinical workflow. Physics-informed networks incorporate the forward model of…

Image and Video Processing · Electrical Eng. & Systems 2022-06-22 D. Karkalousos , S. Noteboom , H. E. Hulst , F. M. Vos , M. W. A. Caan

T2-weighted magnetic resonance imaging (MRI) and diffusion-weighted imaging (DWI) are essential components for cervical cancer diagnosis. However, combining these channels for training deep learning models are challenging due to…

Image and Video Processing · Electrical Eng. & Systems 2023-06-21 Reza Kalantar , Sebastian Curcean , Jessica M Winfield , Gigin Lin , Christina Messiou , Matthew D Blackledge , Dow-Mu Koh

Hyperspectral image (HSI) denoising is a crucial preprocessing procedure to improve the performance of the subsequent HSI interpretation and applications. In this paper, a novel deep learning-based method for this task is proposed, by…

Computer Vision and Pattern Recognition · Computer Science 2018-08-14 Qiangqiang Yuan , Qiang Zhang , Jie Li , Huanfeng Shen , Liangpei Zhang

Deep neural networks have demonstrated highly competitive performance in super-resolution (SR) for natural images by learning mappings from low-resolution (LR) to high-resolution (HR) images. However, hyperspectral super-resolution remains…

Image and Video Processing · Electrical Eng. & Systems 2025-05-02 Usman Muhammad , Jorma Laaksonen , Lyudmila Mihaylova

Biological data including gene expression data are generally high-dimensional and require efficient, generalizable, and scalable machine-learning methods to discover their complex nonlinear patterns. The recent advances in machine learning…

Machine Learning · Computer Science 2020-12-21 Dinesh Singh , Héctor Climente-González , Mathis Petrovich , Eiryo Kawakami , Makoto Yamada

Deep Learning (DL) methods can reconstruct highly accelerated magnetic resonance imaging (MRI) scans, but they rely on application-specific large training datasets and often generalize poorly to out-of-distribution data. Self-supervised…

Image and Video Processing · Electrical Eng. & Systems 2026-04-24 Hongze Yu , Jeffrey A. Fessler , Yun Jiang

Abnormal iron accumulation in the brain subcortical nuclei has been reported to be correlated to various neurodegenerative diseases, which can be measured through the magnetic susceptibility from the quantitative susceptibility mapping…

Image and Video Processing · Electrical Eng. & Systems 2020-08-04 Chao Chai , Pengchong Qiao , Bin Zhao , Huiying Wang , Guohua Liu , Hong Wu , E Mark Haacke , Wen Shen , Chen Cao , Xinchen Ye , Zhiyang Liu , Shuang Xia

The sensitivity of wide-parameter-space searches for continuous gravitational waves (CWs) is limited by their high computational cost. Deep learning is being studied as an alternative method to replace various aspects of a CW search. In…

General Relativity and Quantum Cosmology · Physics 2025-01-24 Prasanna Mohan Joshi , Reinhard Prix

Classifying hyperspectral images (HSIs) is a complex task in remote sensing due to the high-dimensional nature and volume of data involved. To address these challenges, we propose the Spectral-Spatial non-Linear Model, a novel framework…

Computer Vision and Pattern Recognition · Computer Science 2024-12-04 Judy X Yang , Jing Wang , Zekun Long , Chenhong Sui , Jun Zhou

Purpose: To propose a deep learning-based reconstruction framework for ultrafast and robust diffusion tensor imaging and fiber tractography. Methods: We propose SuperDTI to learn the nonlinear relationship between diffusion-weighted images…

Image and Video Processing · Electrical Eng. & Systems 2021-07-27 Hongyu Li , Zifei Liang , Chaoyi Zhang , Ruiying Liu , Jing Li , Weihong Zhang , Dong Liang , Bowen Shen , Xiaoliang Zhang , Yulin Ge , Jiangyang Zhang , Leslie Ying

In recent years, diverging-wave (DW) ultrasound imaging has become a very promising methodology for cardiovascular imaging due to its high temporal resolution. However, if they are limited in number, DW transmits provide lower image quality…

Image and Video Processing · Electrical Eng. & Systems 2020-03-25 Jingfeng Lu , Fabien Millioz , Damien Garcia , Sebastien Salles , Wanyu Liu , Denis Friboulet

Deep learning (DL) has emerged as a tool for improving accelerated MRI reconstruction. A common strategy among DL methods is the physics-based approach, where a regularized iterative algorithm alternating between data consistency and a…

Image and Video Processing · Electrical Eng. & Systems 2020-07-03 Burhaneddin Yaman , Seyed Amir Hossein Hosseini , Steen Moeller , Jutta Ellermann , Kâmil Uǧurbil , Mehmet Akçakaya

A large number of mathematical models have been proposed to describe the measured signal in diffusion-weighted (DW) magnetic resonance imaging (MRI) and infer properties about the white matter microstructure. However, a head-to-head…

Diffusion tensor imaging (DTI) holds significant importance in clinical diagnosis and neuroscience research. However, conventional model-based fitting methods often suffer from sensitivity to noise, leading to decreased accuracy in…

Computer Vision and Pattern Recognition · Computer Science 2024-09-05 Jialong Li , Zhicheng Zhang , Yunwei Chen , Qiqi Lu , Ye Wu , Xiaoming Liu , QianJin Feng , Yanqiu Feng , Xinyuan Zhang

Deep learning in k-space has demonstrated great potential for image reconstruction from undersampled k-space data in fast magnetic resonance imaging (MRI). However, existing deep learning-based image reconstruction methods typically apply…

Image and Video Processing · Electrical Eng. & Systems 2020-06-11 Tianming Du , Honggang Zhang , Yuemeng Li , Hee Kwon Song , Yong Fan

\hspace{2mm} Diffusion-weighted magnetic resonance imaging (dMRI) of the brain offers unique capabilities including noninvasive probing of tissue microstructure and structural connectivity. It is widely used for clinical assessment of…

Image and Video Processing · Electrical Eng. & Systems 2025-12-30 Davood Karimi , Simon K. Warfield

Most Deep Learning (DL) based Compressed Sensing (DCS) algorithms adopt a single neural network for signal reconstruction, and fail to jointly consider the influences of the sampling operation for reconstruction. In this paper, we propose…

Computer Vision and Pattern Recognition · Computer Science 2022-11-17 Chunyan Zeng , Jiaxiang Ye , Zhifeng Wang , Nan Zhao , Minghu Wu

Image reconstruction from undersampled k-space data has been playing an important role for fast MRI. Recently, deep learning has demonstrated tremendous success in various fields and also shown potential to significantly speed up MR…

Image and Video Processing · Electrical Eng. & Systems 2019-07-30 Dong Liang , Jing Cheng , Ziwen Ke , Leslie Ying
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