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A topos theoretic generalisation of the category of sets allows for modelling spaces which vary according to time intervals. Persistent homology, or more generally, persistence is a central tool in topological data analysis, which examines…

Rings and Algebras · Mathematics 2015-06-23 João Pita Costa , Mikael Vejdemo Johansson , Primož Škraba

Persistent homology theory is a relatively new but powerful method in data analysis. Using simplicial complexes, classical persistent homology is able to reveal high dimensional geometric structures of datasets, and represent them as…

Algebraic Topology · Mathematics 2023-12-05 Yaru Gao , Yan Xu , Fengchun Lei

Time dependence is a universal phenomenon in nature, and a variety of mathematical models in terms of dynamical systems have been developed to understand the time-dependent behavior of real-world problems. Originally constructed to analyze…

Algebraic Topology · Mathematics 2018-02-14 Zixuan Cang , Elizabeth Munch , Guo-Wei Wei

The persistence barcode is a topological descriptor of data that plays a fundamental role in topological data analysis. Given a filtration of data, the persistence barcode tracks the evolution of its homology groups. In this paper, we…

Computational Geometry · Computer Science 2025-10-14 Tao Hou , Salman Parsa , Bei Wang

We prove a $C^\infty$ closing lemma for Hamiltonian diffeomorphisms of closed surfaces. This is a consequence of a $C^\infty$ closing lemma for Reeb flows on closed contact three-manifolds, which was recently proved as an application of…

Symplectic Geometry · Mathematics 2016-09-15 Masayuki Asaoka , Kei Irie

This paper is a survey of persistent homology, primarily as it is used in topological data analysis. It includes the theory of persistence modules, as well as stability theorems for persistence barcodes, generalized persistence,…

Algebraic Topology · Mathematics 2020-04-03 Gunnar Carlsson

Given a pointwise finite-dimensional persistence module over a totally ordered set $S$, a theorem of Crawley-Boevey guarantees the existence of a barcode. When the set $S$ is finite, the persistence module is an equioriented type-A quiver…

Algebraic Topology · Mathematics 2025-03-28 Justin Allman , Anran Huang

Our objective in this article is to show a possibly interesting structure of homotopic nature appearing in persistent (co)homology. Assuming that the filtration of the (say) simplicial set embedded in a finite dimensional vector space…

Algebraic Topology · Mathematics 2014-12-08 Estanislao Herscovich

Persistent homology provides information about the lifetime of homology classes along a filtration of cell complexes. Persistence barcode is a graphical representation of such information. A filtration might be determined by time in a set…

Computer Vision and Pattern Recognition · Computer Science 2018-01-04 Rocio Gonzalez-Diaz , Maria-Jose Jimenez , Belen Medrano

We develop a general algebraic framework involving "Poincar\'e--Novikov structures" and "filtered matched pairs" to provide an abstract approach to the barcodes associated to the homologies of interlevel sets of $\mathbb{R}$- or…

Algebraic Topology · Mathematics 2023-06-13 Michael Usher

Dynamic Bayesian networks (DBNs) are a widely used framework for modeling systems whose probabilistic structure evolves over time. Standard inference methods focus on local conditional distributions and can miss larger-scale patterns in how…

Algebraic Topology · Mathematics 2026-05-13 Will Bales , Carmen Rovi

Persistent homology is a popular technique in topological data analysis that tracks the lifespans of homological features in a nested sequence of spaces. This data is typically presented in a multi-set called a persistence diagram or a…

Algebraic Topology · Mathematics 2025-11-26 Deni Salja

We define notions of differentiability for maps from and to the space of persistence barcodes. Inspired by the theory of diffeological spaces, the proposed framework uses lifts to the space of ordered barcodes, from which derivatives can be…

Algebraic Topology · Mathematics 2021-05-05 Jacob Leygonie , Steve Oudot , Ulrike Tillmann

Topological data analysis (TDA) is a rising branch in modern applied mathematics. It extracts topological structures as features of a given space and uses these features to analyze digital data. Persistent homology, one of the central tools…

Algebraic Topology · Mathematics 2025-05-26 Chuan-Shen Hu

Motivated by geometry processing for surfaces with non-trivial topology, we study discrete harmonic maps between closed surfaces of genus at least two. Harmonic maps provide a natural framework for comparing surfaces by minimizing…

Numerical Analysis · Mathematics 2025-09-03 Zhipeng Zhu , Wai Yeung Lam , Lok Ming Lui

We discuss and review recent developments in the area of applied algebraic topology, such as persistent homology and barcodes. In particular, we discuss how these are related to understanding more about manifold learning from random point…

Probability · Mathematics 2015-03-13 Robert J. Adler , Omer Bobrowski , Matthew S. Borman , Eliran Subag , Shmuel Weinberger

We introduce a new feature map for barcodes that arise in persistent homology computation. The main idea is to first realize each barcode as a path in a convenient vector space, and to then compute its path signature which takes values in…

Machine Learning · Statistics 2020-10-28 Ilya Chevyrev , Vidit Nanda , Harald Oberhauser

In this paper we present a new approach to computing homology (with field coefficients) and persistent homology. We use concepts from discrete Morse theory, to provide an algorithm which can be expressed solely in terms of simple graph…

Algebraic Topology · Mathematics 2012-10-26 Paweł Dłotko , Hubert Wagner

The persistence diagram is a central object in the study of persistent homology and has also been investigated in the context of random topology. The more recent notion of the verbose diagram (a.k.a. verbose barcode) is a refinement of the…

Algebraic Topology · Mathematics 2025-09-29 Jeong-hwi Joe , Woojin Kim , Cheolwoo Park

The persistence barcode is a topological descriptor of data that plays a fundamental role in topological data analysis. Given a filtration of the space of data, a persistence barcode tracks the evolution of its homological features. In this…

Computational Geometry · Computer Science 2024-09-11 Salman Parsa , Bei Wang