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Related papers: SiMRX -- A Simulation toolbox for MRX

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The aim of this paper is to provide a solid mathematical discussion of the inverse problem in Magnetorelaxometry Imaging (MRXI), a currently developed technique for quantitative biomedical imaging using magnetic nanoparticles. We provide a…

Numerical Analysis · Mathematics 2021-09-24 Lea Föcke , Daniel Baumgarten , Martin Burger

Realistic simulations of experiments at large scale photon facilities, such as optical laser laboratories, synchrotrons, and free electron lasers, are of vital importance for the successful preparation, execution, and analysis of these…

Multiplex tissue immunostaining is a technology of growing relevance as it can capture in situ the complex interactions existing between the elements of the tumor microenvironment. The existence and availability of large, annotated image…

Computer Vision and Pattern Recognition · Computer Science 2021-03-09 Daniel Jiménez-Sánchez , Mikel Ariz , Carlos Ortiz-de-Solórzano

We present Vinamax, a simulation tool for nanoparticles that aims at simulating magnetization dynamics on very large timescales. To this end, each in dividual nanoparticle is approximated by a macrospin. Vinamax numerically solves the…

Mesoscale and Nanoscale Physics · Physics 2020-12-24 Jonathan Leliaert , Arne Vansteenkiste , Annelies Coene , Luc Dupré , Bartel Van Waeyenberge

Accurate and efficient analysis of materials properties from Nuclear Magnetic Resonance (NMR) relaxation data requires robust and efficient inversion procedures. Despite the great variety of applications requiring to process two-dimensional…

Mathematical Software · Computer Science 2022-01-19 Villiam Bortolotti , Leonardo Brizi , Germana Landi , Anastasiia Nagmutdinova , Fabiana Zama

MNPBEM is a Matlab toolbox for the simulation of metallic nanoparticles (MNP), using a boundary element method (BEM) approach. The main purpose of the toolbox is to solve Maxwell's equations for a dielectric environment where bodies with…

Mesoscale and Nanoscale Physics · Physics 2015-05-30 Ulrich Hohenester , Andreas Trügler

Magnetic vector tomography allows for visualizing the 3D magnetization vector of magnetic nanostructures and multilayers with nanometric resolution. In this work, we present MARTApp (Magnetic Analysis and Reconstruction of Tomographies…

Physics simulators are widely used in robotics fields, from mechanical design to dynamic simulation, and controller design. This paper presents an open-source MATLAB/Simulink simulator for rigid-body articulated systems, including…

Robotics · Computer Science 2022-11-18 Nuno Guedelha , Venus Pasandi , Giuseppe L'Erario , Silvio Traversaro , Daniele Pucci

The world is slowly moving towards everything being simulated digitally and virtually. Mixed Reality (MR) is the amalgam of the real world with virtual stimuli. It has great prospects in the future in terms of various applications…

Human-Computer Interaction · Computer Science 2023-09-06 Dipesh Gyawali

Similarity-driven multi-view linear reconstruction (SiMLR) is an algorithm that exploits inter-modality relationships to transform large scientific datasets into smaller, more well-powered and interpretable low-dimensional spaces. SiMLR…

Machine Learning · Statistics 2021-01-22 Brian B. Avants , Nicholas J. Tustison , James R. Stone

This paper presents an open-source MATLAB/Simulink physics simulator for rigid-body articulated systems, including manipulators and floating-base robots. Thanks to MATLAB/Simulink features like MATLAB system classes and Simulink function…

Robotics · Computer Science 2024-05-15 Nuno Guedelha , Venus Pasandi , Giuseppe L'Erario , Silvio Traversaro , Daniele Pucci

In recent years, aerial platforms have evolved from passive flying sensors into versatile, contact-aware robotic systems, leading to rapid advances in platform design. Standard coplanar and collinear quadrotors have been complemented by…

Robotics · Computer Science 2026-02-24 Nicola Cigarini , Giulia Michieletto , Angelo Cenedese

Matter-RADiation interaction SIMulation (MRADSIM) is an innovative modular software toolkit developed to simulate the effects of radiation on electronic components, human beings and various materials. It incorporates innovative features…

We present MuMax, a general-purpose micromagnetic simulation tool running on Graphical Processing Units (GPUs). MuMax is designed for high performance computations and specifically targets large simulations. In that case speedups of over a…

Computational Physics · Physics 2015-05-27 Arne Vansteenkiste , Ben Van de Wiele

We here present SIMLR (Single-cell Interpretation via Multi-kernel LeaRning), an open-source tool that implements a novel framework to learn a sample-to-sample similarity measure from expression data observed for heterogenous samples. SIMLR…

Genomics · Quantitative Biology 2018-01-22 Bo Wang , Daniele Ramazzotti , Luca De Sano , Junjie Zhu , Emma Pierson , Serafim Batzoglou

Background and Objective: Computational ultrasound imaging has become a well-established methodology in the ultrasound community. Simulations of ultrasound sequences and images allow the study of innovative techniques in terms of emission…

Medical Physics · Physics 2022-03-08 Damien Garcia

Purpose: Conventional MRI is relying on the assumption of the magnetic field being homogeneous in direction and amplitude. However, with the growing interest in portable, affordable point-of-care MRI systems, these assumptions do not…

Medical Physics · Physics 2026-02-17 Fabian Bschorr , Thomas Hüfken , Tobias Lobmeyer , Volker Rasche

Magnetic particle imaging (MPI) is an emerging imaging technique with many applications and a very active field of research. This app provides users with the opportunity to develop some intuition about the inner workings of MPI as it is…

Instrumentation and Detectors · Physics 2024-08-09 The-Vinh Tran-Luu , Mark-Alexander Henn , Klaus N. Quelhas , Solomon I. Woods

XNMR is a system designed to explore the results of combining the well-founded semantics system XSB with the stable-models evaluator SMODELS. Its main goal is to work as a tool for fast and interactive exploration of knowledge bases.

Logic in Computer Science · Computer Science 2007-05-23 L. Castro , D. Warren

In this paper we introduce MATMPC, an open source software built in MATLAB for nonlinear model predictive control (NMPC). It is designed to facilitate modelling, controller design and simulation for a wide class of NMPC applications. MATMPC…

Systems and Control · Computer Science 2019-09-24 Yutao Chen , Mattia Bruschetta , Enrico Picotti , Alessandro Beghi
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