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Biomedical imaging is a driver of scientific discovery and core component of medical care, currently stimulated by the field of deep learning. While semantic segmentation algorithms enable 3D image analysis and quantification in many…

Computer Vision and Pattern Recognition · Computer Science 2020-12-09 Fabian Isensee , Paul F. Jäger , Simon A. A. Kohl , Jens Petersen , Klaus H. Maier-Hein

The release of nnU-Net marked a paradigm shift in 3D medical image segmentation, demonstrating that a properly configured U-Net architecture could still achieve state-of-the-art results. Despite this, the pursuit of novel architectures, and…

Computer Vision and Pattern Recognition · Computer Science 2024-07-26 Fabian Isensee , Tassilo Wald , Constantin Ulrich , Michael Baumgartner , Saikat Roy , Klaus Maier-Hein , Paul F. Jaeger

Automatic medical image segmentation is a crucial topic in the medical domain and successively a critical counterpart in the computer-aided diagnosis paradigm. U-Net is the most widespread image segmentation architecture due to its…

Medical Image Segmentation (MIS) includes diverse tasks, from bone to organ segmentation, each with its own challenges in finding the best segmentation model. The state-of-the-art AutoML-related MIS-framework nnU-Net automates many aspects…

Computer Vision and Pattern Recognition · Computer Science 2025-05-28 Jannis Becktepe , Leona Hennig , Steffen Oeltze-Jafra , Marius Lindauer

Image segmentation is a fundamental task in image analysis and clinical practice. The current state-of-the-art techniques are based on U-shape type encoder-decoder networks with skip connections, called U-Net. Despite the powerful…

Computer Vision and Pattern Recognition · Computer Science 2023-02-02 Chun-Wun Cheng , Christina Runkel , Lihao Liu , Raymond H Chan , Carola-Bibiane Schönlieb , Angelica I Aviles-Rivero

Semantic image segmentation is the process of labeling each pixel of an image with its corresponding class. An encoder-decoder based approach, like U-Net and its variants, is a popular strategy for solving medical image segmentation tasks.…

Image and Video Processing · Electrical Eng. & Systems 2020-06-30 Debesh Jha , Michael A. Riegler , Dag Johansen , Pål Halvorsen , Håvard D. Johansen

The current state-of-the art techniques for image segmentation are often based on U-Net architectures, a U-shaped encoder-decoder networks with skip connections. Despite the powerful performance, the architecture often does not perform well…

Computer Vision and Pattern Recognition · Computer Science 2023-12-20 Asbjørn Munk , Ao Ma , Mads Nielsen

The rise of Transformer architectures has advanced medical image segmentation, leading to hybrid models that combine Convolutional Neural Networks (CNNs) and Transformers. However, these models often suffer from excessive complexity and…

Image and Video Processing · Electrical Eng. & Systems 2025-07-17 Yousef Sadegheih , Afshin Bozorgpour , Pratibha Kumari , Reza Azad , Dorit Merhof

Semantic segmentation is one of the most popular research areas in medical image computing. Perhaps surprisingly, despite its conceptualization dating back to 2018, nnU-Net continues to provide competitive out-of-the-box solutions for a…

Image and Video Processing · Electrical Eng. & Systems 2022-08-24 Fabian Isensee , Constantin Ulrich , Tassilo Wald , Klaus H. Maier-Hein

U-net is an image segmentation technique developed primarily for medical image analysis that can precisely segment images using a scarce amount of training data. These traits provide U-net with a very high utility within the medical imaging…

Image and Video Processing · Electrical Eng. & Systems 2021-06-10 Nahian Siddique , Paheding Sidike , Colin Elkin , Vijay Devabhaktuni

Deep learning architecture with convolutional neural network (CNN) achieves outstanding success in the field of computer vision. Where U-Net, an encoder-decoder architecture structured by CNN, makes a great breakthrough in biomedical image…

Image and Video Processing · Electrical Eng. & Systems 2023-02-13 Qing Xu , Zhicheng Ma , Na HE , Wenting Duan

The self-configuring nnU-Net has achieved leading performance in a large range of medical image segmentation challenges. It is widely considered as the model of choice and a strong baseline for medical image segmentation. However, despite…

Computer Vision and Pattern Recognition · Computer Science 2024-05-02 Yidong Zhao , Changchun Yang , Artur Schweidtmann , Qian Tao

Fully convolutional neural networks like U-Net have been the state-of-the-art methods in medical image segmentation. Practically, a network is highly specialized and trained separately for each segmentation task. Instead of a collection of…

Image and Video Processing · Electrical Eng. & Systems 2019-09-16 Chao Huang , Hu Han , Qingsong Yao , Shankuan Zhu , S. Kevin Zhou

Medical images often exhibit low and blurred contrast between lesions and surrounding tissues, with considerable variation in lesion edges and shapes even within the same disease, leading to significant challenges in segmentation.…

Image and Video Processing · Electrical Eng. & Systems 2025-02-12 Wang Jiangtao , Nur Intan Raihana Ruhaiyem , Fu Panpan

Medical image segmentation plays a crucial role in advancing healthcare systems for disease diagnosis and treatment planning. The u-shaped architecture, popularly known as U-Net, has proven highly successful for various medical image…

Computer Vision and Pattern Recognition · Computer Science 2023-10-13 Jieneng Chen , Jieru Mei , Xianhang Li , Yongyi Lu , Qihang Yu , Qingyue Wei , Xiangde Luo , Yutong Xie , Ehsan Adeli , Yan Wang , Matthew Lungren , Lei Xing , Le Lu , Alan Yuille , Yuyin Zhou

Many recent medical segmentation systems rely on powerful deep learning models to solve highly specific tasks. To maximize performance, it is standard practice to evaluate numerous pipelines with varying model topologies, optimization…

Machine Learning · Computer Science 2019-11-06 Mathias Perslev , Erik Bjørnager Dam , Akshay Pai , Christian Igel

Medical imaging plays a crucial role in modern healthcare by providing non-invasive visualisation of internal structures and abnormalities, enabling early disease detection, accurate diagnosis, and treatment planning. This study aims to…

Image and Video Processing · Electrical Eng. & Systems 2023-09-25 Walid Ehab , Yongmin Li

This paper proposes a novel U-Net variant using stacked dilated convolutions for medical image segmentation (SDU-Net). SDU-Net adopts the architecture of vanilla U-Net with modifications in the encoder and decoder operations (an operation…

In recent years Deep Learning has brought about a breakthrough in Medical Image Segmentation. U-Net is the most prominent deep network in this regard, which has been the most popular architecture in the medical imaging community. Despite…

Computer Vision and Pattern Recognition · Computer Science 2019-09-17 Nabil Ibtehaz , M. Sohel Rahman

In recent years, convolutional neural networks (CNNs) have revolutionized medical image analysis. One of the most well-known CNN architectures in semantic segmentation is the U-net, which has achieved much success in several medical image…

Image and Video Processing · Electrical Eng. & Systems 2020-03-10 Wei Hao Khoong
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