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Neural networks for automated image segmentation are typically trained to achieve maximum accuracy, while less attention has been given to the calibration of their confidence scores. However, well-calibrated confidence scores provide…

Image and Video Processing · Electrical Eng. & Systems 2020-10-28 Axel-Jan Rousseau , Thijs Becker , Jeroen Bertels , Matthew B. Blaschko , Dirk Valkenborg

Tumor segmentation in PET-CT images is challenging due to the dual nature of the acquired information: low metabolic information in CT and low spatial resolution in PET. U-Net architecture is the most common and widely recognized approach…

Image and Video Processing · Electrical Eng. & Systems 2022-10-06 Simone Bendazzoli , Mehdi Astaraki

This paper introduces a novel approach to synthesize healthy 3D brain tissue from masked input images, specifically focusing on the task of 'ASNR-MICCAI BraTS Local Synthesis of Tissue via Inpainting'. Our proposed method employs a…

Image and Video Processing · Electrical Eng. & Systems 2025-07-25 Juexin Zhang , Ying Weng , Ke Chen

This paper reports Deep LOGISMOS approach to 3D tumor segmentation by incorporating boundary information derived from deep contextual learning to LOGISMOS - layered optimal graph image segmentation of multiple objects and surfaces. Accurate…

Computer Vision and Pattern Recognition · Computer Science 2018-01-29 Zhihui Guo , Ling Zhang , Le Lu , Mohammadhadi Bagheri , Ronald M. Summers , Milan Sonka , Jianhua Yao

In this paper we approach the problem of skin lesion segmentation using a convolutional neural network based on the U-Net architecture. We present a set of training strategies that had a significant impact on the performance of this model.…

Computer Vision and Pattern Recognition · Computer Science 2018-11-29 Fred Guth , Teofilo E. deCampos

In this paper, we propose a bottleneck supervised (BS) U-Net model for liver and tumor segmentation. Our main contributions are: first, we propose a variation of the original U-Net that incorporates dense modules, inception modules and…

Computer Vision and Pattern Recognition · Computer Science 2019-03-14 Song Li , Geoffrey Kwok Fai Tso

Reliable tumor segmentation in thoracic computed tomography (CT) remains challenging due to boundary ambiguity, class imbalance, and anatomical variability. We propose an uncertainty-guided, coarse-to-fine segmentation framework that…

Computer Vision and Pattern Recognition · Computer Science 2025-07-04 Ilkin Sevgi Isler , David Mohaisen , Curtis Lisle , Damla Turgut , Ulas Bagci

Abdominal multi-organ segmentation of computed tomography (CT) images has been the subject of extensive research interest. It presents a substantial challenge in medical image processing, as the shape and distribution of abdominal organs…

Computer Vision and Pattern Recognition · Computer Science 2020-02-12 Yuchen Xu , Olivia Tang , Yucheng Tang , Ho Hin Lee , Yunqiang Chen , Dashan Gao , Shizhong Han , Riqiang Gao , Michael R. Savona , Richard G. Abramson , Yuankai Huo , Bennett A. Landman

Automatic segmentation of diverse heterogeneous brain lesions using multi-modal MRI is a challenging problem in clinical neuroimaging, mainly because of the lack of generalizability and high prediction variance of pathology-specific deep…

Computer Vision and Pattern Recognition · Computer Science 2026-02-24 Md. Mehedi Hassan , Shafqat Alam , Shahriar Ahmed Seam , Maruf Ahmed

Identifying key pathological features in brain MRIs is crucial for the long-term survival of glioma patients. However, manual segmentation is time-consuming, requiring expert intervention and is susceptible to human error. Therefore,…

Kidney tumor segmentation emerges as a new frontier of computer vision in medical imaging. This is partly due to its challenging manual annotation and great medical impact. Within the scope of the Kidney Tumor Segmentation Challenge 2019,…

Image and Video Processing · Electrical Eng. & Systems 2019-10-18 Minh H. Vu , Guus Grimbergen , Attila Simkó , Tufve Nyholm , Tommy Löfstedt

We present the first application of deep neural networks to the semantic segmentation of cosmological filaments and walls in the Large Scale Structure of the Universe. Our results are based on a deep Convolutional Neural Network (CNN) with…

Cosmology and Nongalactic Astrophysics · Physics 2019-02-13 Miguel A. Aragon-Calvo

Purpose: The purpose of this study is to investigate the robustness of a commonly-used convolutional neural network for image segmentation with respect to visually-subtle adversarial perturbations, and suggest new methods to make these…

Image and Video Processing · Electrical Eng. & Systems 2019-08-05 Zheng Liu , Jinnian Zhang , Varun Jog , Po-Ling Loh , Alan B McMillan

For 3D medical image (e.g. CT and MRI) segmentation, the difficulty of segmenting each slice in a clinical case varies greatly. Previous research on volumetric medical image segmentation in a slice-by-slice manner conventionally use the…

Image and Video Processing · Electrical Eng. & Systems 2022-07-12 Wenxuan Wang , Chen Chen , Jing Wang , Sen Zha , Yan Zhang , Jiangyun Li

Purpose: The segmentation of brain tumors is one of the most active areas of medical image analysis. While current methods perform superhuman on benchmark data sets, their applicability in daily clinical practice has not been evaluated. In…

Image and Video Processing · Electrical Eng. & Systems 2020-12-17 Sabine Müller , Joachim Weickert , Norbert Graf

Retinal vessel segmentation is an essential step for fundus image analysis. With the recent advances of deep learning technologies, many convolutional neural networks have been applied in this field, including the successful U-Net. In this…

Image and Video Processing · Electrical Eng. & Systems 2019-11-11 Weilin Fu , Katharina Breininger , Zhaoya Pan , Andreas Maier

Accurate segmentation of brain tumors is vital for diagnosis, surgical planning, and treatment monitoring. Deep learning has advanced on benchmarks, but two issues limit clinical use: no uncertainty estimates for errors and no segmentation…

Computer Vision and Pattern Recognition · Computer Science 2025-11-18 Andrew Zhou

We propose combining memory saving techniques with traditional U-Net architectures to increase the complexity of the models on the Brain Tumor Segmentation (BraTS) challenge. The BraTS challenge consists of a 3D segmentation of a…

Image and Video Processing · Electrical Eng. & Systems 2021-04-22 Mihir Pendse , Vithursan Thangarasa , Vitaliy Chiley , Ryan Holmdahl , Joel Hestness , Dennis DeCoste

Automated segmentation proves to be a valuable tool in precisely detecting tumors within medical images. The accurate identification and segmentation of tumor types hold paramount importance in diagnosing, monitoring, and treating highly…

Image and Video Processing · Electrical Eng. & Systems 2024-03-15 Fadillah Maani , Anees Ur Rehman Hashmi , Mariam Aljuboory , Numan Saeed , Ikboljon Sobirov , Mohammad Yaqub

Class imbalance has emerged as one of the major challenges for medical image segmentation. The model cascade (MC) strategy significantly alleviates the class imbalance issue via running a set of individual deep models for coarse-to-fine…

Computer Vision and Pattern Recognition · Computer Science 2020-04-22 Chenhong Zhou , Changxing Ding , Xinchao Wang , Zhentai Lu , Dacheng Tao