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Background: Automatic extraction of chemical-disease relations (CDR) from unstructured text is of essential importance for disease treatment and drug development. Meanwhile, biomedical experts have built many highly-structured knowledge…

Computation and Language · Computer Science 2019-12-24 Huiwei Zhou , Chengkun Lang , Zhuang Liu , Shixian Ning , Yingyu Lin , Lei Du

External knowledge is often useful for natural language understanding tasks. We introduce a contextual text representation model called Conceptual-Contextual (CC) embeddings, which incorporates structured knowledge into text…

Computation and Language · Computer Science 2020-03-13 Xiao Zhang , Dejing Dou , Ji Wu

Recurrent Neural Networks (RNNs) have been proven to be effective in modeling sequential data and they have been applied to boost a variety of tasks such as document classification, speech recognition and machine translation. Most of…

Computation and Language · Computer Science 2018-08-21 Zhiwei Wang , Yao Ma , Dawei Yin , Jiliang Tang

Visual Question Answering (VQA) has emerged as one of the most challenging tasks in artificial intelligence due to its multi-modal nature. However, most existing VQA methods are incapable of handling Knowledge-based Visual Question…

Computer Vision and Pattern Recognition · Computer Science 2023-12-21 Chengxiang Yin , Zhengping Che , Kun Wu , Zhiyuan Xu , Jian Tang

Tree-structured recursive neural networks (TreeRNNs) for sentence meaning have been successful for many applications, but it remains an open question whether the fixed-length representations that they learn can support tasks as demanding as…

Computation and Language · Computer Science 2015-05-15 Samuel R. Bowman , Christopher Potts , Christopher D. Manning

Clinical outcome prediction plays an important role in stroke patient management. From a machine learning point-of-view, one of the main challenges is dealing with heterogeneous data at patient admission, i.e. the image data which are…

Image and Video Processing · Electrical Eng. & Systems 2022-05-12 Nima Hatami , Tae-Hee Cho , Laura Mechtouff , Omer Faruk Eker , David Rousseau , Carole Frindel

Recent years have seen particular interest in using electronic medical records (EMRs) for secondary purposes to enhance the quality and safety of healthcare delivery. EMRs tend to contain large amounts of valuable clinical notes. Learning…

Computation and Language · Computer Science 2022-07-25 Hoda Memarzadeh , Nasser Ghadiri , Maryam Lotfi Shahreza

Deep learning has advanced NLP, but interpretability remains limited, especially in healthcare and finance. Concept bottleneck models tie predictions to human concepts in vision, but NLP versions either use binary activations that harm text…

Computation and Language · Computer Science 2026-03-31 Yibo Yang

Predictive models in acute care settings must be able to immediately recognize precipitous changes in a patient's status when presented with data reflecting such changes. Recurrent neural networks (RNNs) have become common for training and…

Machine Learning · Computer Science 2020-07-30 David Ledbetter , Eugene Laksana , Melissa Aczon , Randall Wetzel

We reassess the Knowledge Neuron (KN) Thesis: an interpretation of the mechanism underlying the ability of large language models to recall facts from a training corpus. This nascent thesis proposes that facts are recalled from the training…

Computation and Language · Computer Science 2024-05-07 Jingcheng Niu , Andrew Liu , Zining Zhu , Gerald Penn

Hidden Markov models (HMMs) are commonly used for disease progression modeling when the true patient health state is not fully known. Since HMMs typically have multiple local optima, incorporating additional patient covariates can improve…

Machine Learning · Statistics 2021-10-05 Matt Baucum , Anahita Khojandi , Theodore Papamarkou

In the last few years, Recurrent Neural Networks (RNNs) have proved effective on several NLP tasks. Despite such great success, their ability to model \emph{sequence labeling} is still limited. This lead research toward solutions where RNNs…

Computation and Language · Computer Science 2017-06-07 Yoann Dupont , Marco Dinarelli , Isabelle Tellier

Understanding neural networks is challenging due to their high-dimensional, interacting components. Inspired by human cognition, which processes complex sensory data by chunking it into recurring entities, we propose leveraging this…

Machine Learning · Computer Science 2025-02-05 Shuchen Wu , Stephan Alaniz , Eric Schulz , Zeynep Akata

Intelligent systems based on first-order logic on the one hand, and on artificial neural networks (also called connectionist systems) on the other, differ substantially. It would be very desirable to combine the robust neural networking…

Artificial Intelligence · Computer Science 2007-05-23 Sebastian Bader , Pascal Hitzler , Steffen Hoelldobler

Recurrent neural networks (RNN) are popular for many computer vision tasks, including multi-label classification. Since RNNs produce sequential outputs, labels need to be ordered for the multi-label classification task. Current approaches…

Computer Vision and Pattern Recognition · Computer Science 2020-03-13 Vacit Oguz Yazici , Abel Gonzalez-Garcia , Arnau Ramisa , Bartlomiej Twardowski , Joost van de Weijer

Timely and accurate diagnosis of neurodegenerative disorders, such as Alzheimer's disease, is central to disease management. Existing deep learning models require large-scale annotated datasets and often function as "black boxes".…

Computer Vision and Pattern Recognition · Computer Science 2025-04-15 Duy-Cat Can , Quang-Huy Tang , Huong Ha , Binh T. Nguyen , Oliver Y. Chén

Machine learning in healthcare requires effective representation of structured medical codes, but current methods face a trade off: knowledge graph based approaches capture formal relationships but miss real world patterns, while data…

Machine Learning · Computer Science 2025-10-07 Ahmed Elhussein , Paul Meddeb , Abigail Newbury , Jeanne Mirone , Martin Stoll , Gamze Gursoy

One of the key challenges in natural language processing (NLP) is to yield good performance across application domains and languages. In this work, we investigate the robustness of the mention detection systems, one of the fundamental tasks…

Computation and Language · Computer Science 2016-02-26 Thien Huu Nguyen , Avirup Sil , Georgiana Dinu , Radu Florian

In recent years, there has been a resurgence in methods that use distributed (neural) representations to represent and reason about semantic knowledge for robotics applications. However, while robots often observe previously unknown…

Robotics · Computer Science 2021-05-11 Angel Daruna , Mehul Gupta , Mohan Sridharan , Sonia Chernova

Knowledge graph embedding models have gained significant attention in AI research. Recent works have shown that the inclusion of background knowledge, such as logical rules, can improve the performance of embeddings in downstream machine…

Artificial Intelligence · Computer Science 2019-08-21 Mojtaba Nayyeri , Chengjin Xu , Jens Lehmann , Hamed Shariat Yazdi