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Geometric deep learning has demonstrated a great potential in non-Euclidean data analysis. The incorporation of geometric insights into learning architecture is vital to its success. Here we propose a curvature-enhanced graph convolutional…

Quantitative Methods · Quantitative Biology 2023-06-27 Cong Shen , Pingjian Ding , Junjie Wee , Jialin Bi , Jiawei Luo , Kelin Xia

Directionality is a fundamental feature of network connections. Most structural brain networks are intrinsically directed because of the nature of chemical synapses, which comprise most neuronal connections. Due to limitations of…

Neurons and Cognition · Quantitative Biology 2018-01-19 Penelope Kale , Andrew Zalesky , Leonardo L. Gollo

The chain graph model admits both undirected and directed edges in one graph, where symmetric conditional dependencies are encoded via undirected edges and asymmetric causal relations are encoded via directed edges. Though frequently…

Methodology · Statistics 2024-01-29 Ruixuan Zhao , Haoran Zhang , Junhui Wang

In this study, we propose a neural network approach to capture the functional connectivities among anatomic brain regions. The suggested approach estimates a set of brain networks, each of which represents the connectivity patterns of a…

Computer Vision and Pattern Recognition · Computer Science 2018-07-24 Baran Baris Kivilcim , Itir Onal Ertugrul , Fatos T. Yarman Vural

This work studies the limitations of uniquely identifying the structure (i.e., topology) of a networked linear system from partial measurements of its nodal dynamics. In general, many networks can be consistent with these measurements; this…

Systems and Control · Electrical Eng. & Systems 2026-03-13 Jaidev Gill , Jing Shuang Li

In this paper, controllability of undirected networked systems with {diffusively coupled subsystems} is considered, where each subsystem is of {identically {\emph{fixed}}} general high-order single-input-multi-output dynamics. The…

Systems and Control · Electrical Eng. & Systems 2020-04-21 Yuan Zhang , Yuanqing Xia , Han Gao , Guangchen Zhang

We survey some recent work using Ricci flow to create a class of local definitions of weak lower scalar curvature bounds that is well defined for $C^0$ metrics. We discuss several properties of these definitions and explain some…

Differential Geometry · Mathematics 2020-12-18 Paula Burkhardt-Guim

Traditional graph analysis focuses on nodes and edges, that is, pairwise relationships. Yet many real-world networks, including biological, social, and communication networks, involve higher-order relationships in which multiple nodes…

General Mathematics · Mathematics 2026-05-15 Heitor Baldo , Luiz A. Baccalá , André Fujita , Koichi Sameshima

Bidirected graphs generalize directed and undirected graphs in that edges are oriented locally at every node. The natural notion of the degree of a node that takes into account (local) orientations is that of net-degree. In this paper, we…

Combinatorics · Mathematics 2017-04-11 Laura Gellert , Raman Sanyal

Networks may, or may not, be wired to have a core that is both itself densely connected and central in terms of graph distance. In this study we propose a coefficient to measure if the network has such a clear-cut core-periphery dichotomy.…

Physics and Society · Physics 2007-05-23 Petter Holme

Many complex networks are described by directed links; in such networks, a link represents, for example, the control of one node over the other node or unidirectional information flows. Some centrality measures are used to determine the…

Physics and Society · Physics 2009-10-24 Naoki Masuda , Yoji Kawamura , Hiroshi Kori

This paper presents a mathematical framework for analyzing machine learning models through the geometry of their induced partitions. By representing partitions as Riemannian simplicial complexes, we capture not only adjacency relationships…

Machine Learning · Computer Science 2025-08-05 Pawel Gajer , Jacques Ravel

Despite the enormous success of graph neural networks (GNNs), most existing GNNs can only be applicable to undirected graphs where relationships among connected nodes are two-way symmetric (i.e., information can be passed back and forth).…

Machine Learning · Computer Science 2021-10-15 Zhuo Tan , Bin Liu , Guosheng Yin

Network representation learning has traditionally been used to find lower dimensional vector representations of the nodes in a network. However, there are very important edge driven mining tasks of interest to the classical network analysis…

Social and Information Networks · Computer Science 2019-12-12 Sambaran Bandyopadhyay , Anirban Biswas , M. N. Murty , Ramasuri Narayanam

This paper advances the state of the art in girth approximation within the CONGEST model. Manoharan and Ramachandran [PODC '24] provided the first significant improvement in girth approximation in over a decade. We build on this momentum…

Data Structures and Algorithms · Computer Science 2026-03-31 Shiri Chechik , Gur Lifshitz , Doron Mukhtar

In this paper, we derive new sharp diameter bounds for distance regular graphs, which better answer a problem raised by Neumaier and Penji\' c in many cases. Our proof is built upon a relation between the diameter and long-scale Ollivier…

Combinatorics · Mathematics 2025-09-01 Kaizhe Chen , Shiping Liu

Power law distribution is common in real-world networks including online social networks. Many studies on complex networks focus on the characteristics of vertices, which are always proved to follow the power law. However, few researches…

Social and Information Networks · Computer Science 2015-06-12 Xiaohan Wang , Zhaoqun Chen , Pengfei Liu , Yuantao Gu

First principle network models are crucial to make sense of the intricate topology of real complex networks. While modeling efforts have been quite successful in undirected networks, generative models for networks with asymmetric…

Physics and Society · Physics 2023-02-20 Antoine Allard , M. Ángeles Serrano , Marián Boguñá

Several large scale networks, such as the backbone of the Internet, have been observed to behave like convex Riemannian manifolds of negative curvature. In particular, this paradigm explains the observed existence, for networks of this…

Differential Geometry · Mathematics 2021-08-17 Dong Zhang

Trees have long been used as a graphical representation of species relationships. However complex evolutionary events, such as genetic reassortments or hybrid speciations which occur commonly in viruses, bacteria and plants, do not fit into…

Populations and Evolution · Quantitative Biology 2017-07-24 Sebastien Roch , Kun-Chieh Wang
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