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We propose a modification to the study of site-wise dynamically disordered totally asymmetric simple exclusion process (TASEP). Motivated by the process of gene transcription, a study in ref. \cite{waclaw2019totally} introduced an extension…

Statistical Mechanics · Physics 2024-05-13 Nikhil Bhatia , Arvind Kumar Gupta

We investigate the totally asymmetric simple exclusion process (TASEP) in the presence of obstacles that dynamically bind and unbind from the lattice. The model is motivated by biological processes such as transcription in the presence of…

Statistical Mechanics · Physics 2020-10-21 Juraj Szavits-Nossan , Bartlomiej Waclaw

We consider a family of totally asymmetric simple exclusion processes (TASEPs), consisting of particles on a lattice that require binding by a "token" in various physical configurations to advance over the lattice. Using a combination of…

Statistical Mechanics · Physics 2025-02-11 Bor Kavčič , Gašper Tkačik

We investigate the totally asymmetric simple exclusion process (TASEP) in the presence of a bottleneck, i.e. a sequence of consecutive defect sites with reduced hopping rate. The influence of such a bottleneck on the phase diagram is…

Cellular Automata and Lattice Gases · Physics 2009-11-13 Philip Greulich , Andreas Schadschneider

The process of protein synthesis in biological systems resembles a one dimensional driven lattice gas in which the particles have spatial extent, covering more than one lattice site. We expand the well studied Totally Asymmetric Exclusion…

Statistical Mechanics · Physics 2009-11-10 Leah B. Shaw , R. K. P. Zia , Kelvin H. Lee

A system consisting of two parallel coupled channels where particles in one of them follow the rules of totally asymmetric exclusion processes (TASEP) and in another one move as in symmetric simple exclusion processes (SSEP) is investigated…

Statistical Mechanics · Physics 2009-11-13 K. Tsekouras , A. B. Kolomeisky

Totally asymmetric simple exclusion processes (TASEP) with particles which occupy more than one lattice site and with a local inhomogeneity far away from the boundaries are investigated. These non-equilibrium processes are relevant for the…

Statistical Mechanics · Physics 2009-11-10 Leah B. Shaw , Anatoly B. Kolomeisky , Kelvin H. Lee

A discrete-time totally asymmetric simple exclusion process on a lattice with open boundaries is considered. There are particles of different types. The type of a particle is characterized by the probability that a particle moves to a…

Statistical Mechanics · Physics 2025-11-04 Marina V. Yashina , Alexander G. Tatashev

We study a continuous-space version of the totally asymmetric simple exclusion process (TASEP), consisting of interacting Brownian particles subject to a driving force in a periodic external potential. Particles are inserted at the leftmost…

Statistical Mechanics · Physics 2010-02-02 Jose Eduardo de Oliveira Rodrigues , Ronald Dickman

Totally asymmetric simple exclusion process (TASEP) sets the paradigm for one-dimensional driven single file motion. We study a periodic TASEP with two ``road blocks'' or defects of different kinds, one point and another extended, across…

Statistical Mechanics · Physics 2024-12-31 Atri Goswami , Rohn Chatterjee , Sudip Mukherjee

The totally asymmetric simple exclusion process (TASEP) is a stochastic model for the unidirectional flow of interacting particles on a 1D-lattice that is much used in systems biology and statistical physics. Its master equation describes…

Dynamical Systems · Mathematics 2026-04-20 Kilian Pioch , Lars Grüne , Thomas Kriecherbauer , Michael Margaliot

The totally asymmetric simple exclusion process (TASEP) is a stochastic model for the unidirectional dynamics of interacting particles on a $1$D-lattice that is much used in systems biology and statistical physics. Its master equation…

Statistical Mechanics · Physics 2024-08-01 Kilian Pioch , Thomas Kriecherbauer , Michael Margaliot , Lars Grüne

The steady-state currents and densities of a one-dimensional totally asymmetric exclusion process (TASEP) with particles that occlude an integer number ($d$) of lattice sites are computed using various mean field approximations and Monte…

Statistical Mechanics · Physics 2007-05-23 G. W. Lakatos , T. Chou

Fundamental biological processes such as transcription and translation, where a genetic sequence is sequentially read by a macromolecule, have been well described by a classical model of non-equilibrium statistical physics, the totally…

Quantitative Methods · Quantitative Biology 2019-08-15 Jingkui Wang , Benjamin Pfeuty , Quentin Thommen , Carmen Romano , Marc Lefranc

We formulate and analyze the steady-state behavior of totally asymmetric simple exclusion processes (TASEPs) that contain periodically varying movement rates. In our models, particles at a majority sites hop to the right with rate $p_1$…

Statistical Mechanics · Physics 2007-05-23 Greg Lakatos , Tom Chou , Anatoly Kolomeisky

We study the effects of local inhomogeneities, i.e., slow sites of hopping rate $q<1$, in a totally asymmetric simple exclusion process (TASEP) for particles of size $\ell \geq 1$ (in units of the lattice spacing). We compare the simulation…

Statistical Mechanics · Physics 2008-05-21 J. J. Dong , B. Schmittmann , R. K. P. Zia

The generalized totally asymmetric exclusion process (TASEP) [J. Stat. Mech. P05014 (2012)] is an integrable generalization of the TASEP equipped with an interaction, which enhances the clustering of particles. The process interpolates…

Mathematical Physics · Physics 2015-02-24 A. E. Derbyshev , A. M. Povolotsky , V. B. Priezzhev

Theoretical advances in the study of non-equilibrium phenomena are briefly reviewed with emphasis on steady state properties of one-dimensional driven lattice gases. The presentation is focused on the totally asymmetric simple-exclusion…

Statistical Mechanics · Physics 2008-03-19 J. G. Brankov , N. C. Pesheva , N. Zh. Bunzarova

We revisit the defect-induced nonequilibrium phase transition from a largely homogeneous free-flow phase to a phase-separated congested phase in the sublattice totally asymmetric simple exclusion process (TASEP) with local deterministic…

Statistical Mechanics · Physics 2023-06-27 Gunter M. Schütz

We study here one-dimensional model of aggregation and fragmentation of clusters of particles obeying the stochastic discrete-time kinetics of the generalized Totally Asymmetric Simple Exclusion Process (gTASEP) on open chains. Isolated…

Statistical Mechanics · Physics 2019-09-04 N. Zh. Bunzarova , N. C. Pesheva , J. G. Brankov
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