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Persistent homology is a popular method for computing topological features of (metric) data. Standard approaches based on the \v{C}ech or Rips filtration are stable under small perturbations of the data, but highly sensitive to outliers.…

Algebraic Topology · Mathematics 2026-02-27 Pepijn Roos Hoefgeest , Lucas Slot

Sequential algorithms for the Stable Matching Problem are often too slow in the context of some large scale applications like switch scheduling. Parallel architectures can offer a notable decrease in runtime complexity. We propose a stable…

Data Structures and Algorithms · Computer Science 2024-08-27 Scott Wynn , Alec Kyritsis , Stephora Alberi , Enyue Lu

Heterogeneity has been an indispensable aspect of distributed computing throughout the history of these systems. In particular, with the increasing prevalence of accelerator technologies (e.g., GPUs and TPUs) and the emergence of…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-12-23 Ali Mokhtari , Mohsen Amini Salehi

Topological data analysis combines machine learning with methods from algebraic topology. Persistent homology, a method to characterize topological features occurring in data at multiple scales is of particular interest. A major obstacle to…

Algebraic Topology · Mathematics 2019-04-25 Nello Blaser , Morten Brun

Topological data analysis (TDA) aims to extract noise-robust features from a data set by examining the number and persistence of holes in its topology. We show that a computational problem closely related to a core task in TDA --…

Quantum Physics · Physics 2024-10-29 Casper Gyurik , Alexander Schmidhuber , Robbie King , Vedran Dunjko , Ryu Hayakawa

We propose a benchmarking strategy that is robust in the presence of timer error, OS jitter and other environmental fluctuations, and is insensitive to the highly nonideal statistics produced by timing measurements. We construct a model…

Performance · Computer Science 2016-08-16 Jiahao Chen , Jarrett Revels

In recent years, artificial intelligence (AI) technologies have found industrial applications in various fields. AI systems typically possess complex software and heterogeneous CPU/GPU hardware architecture, making it difficult to answer…

Software Engineering · Computer Science 2022-04-08 Vyacheslav Zhdanovskiy , Lev Teplyakov , Anton Grigoryev

Homomorphic Encryption (HE) draws a significant attention as a privacy-preserving way for cloud computing because it allows computation on encrypted messages called ciphertexts. Among numerous HE schemes proposed, HE for Arithmetic of…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-07-15 Wonkyung Jung , Eojin Lee , Sangpyo Kim , Keewoo Lee , Namhoon Kim , Chohong Min , Jung Hee Cheon , Jung Ho Ahn

We present a new tool for data analysis: persistence discrete homology, which is well-suited to analyze filtrations of graphs. In particular, we provide a novel way of representing high-dimensional data as a filtration of graphs using…

Algebraic Topology · Mathematics 2025-06-23 Chris Kapulkin , Nathan Kershaw

Understanding the decision-making processes of large language models is critical given their widespread applications. To achieve this, we aim to connect a formal mathematical framework - zigzag persistence from topological data analysis -…

Computation and Language · Computer Science 2025-06-16 Yuri Gardinazzi , Karthik Viswanathan , Giada Panerai , Alessio Ansuini , Alberto Cazzaniga , Matteo Biagetti

We present an efficient algorithm to compute Euler characteristic curves of gray scale images of arbitrary dimension. In various applications the Euler characteristic curve is used as a descriptor of an image. Our algorithm is the first…

Computer Vision and Pattern Recognition · Computer Science 2018-10-18 Teresa Heiss , Hubert Wagner

Persistent homology (PH) is one of the most popular tools in topological data analysis (TDA), while graph theory has had a significant impact on data science. Our earlier work introduced the persistent spectral graph (PSG) theory as a…

Algebraic Topology · Mathematics 2020-12-22 Rui Wang , Rundong Zhao , Emily Ribando-Gros , Jiahui Chen , Yiying Tong , Guo-Wei Wei

Persistent (co)homology is a central construction in topological data analysis, where it is used to quantify prominence of features in data to produce stable descriptors suitable for downstream analysis. Persistence is challenging to…

Computational Geometry · Computer Science 2024-10-23 Arnur Nigmetov , Dmitriy Morozov

High-quality training data is the foundation of machine learning and artificial intelligence, shaping how models learn and perform. Although much is known about what types of data are effective for training, the impact of the data's…

Machine Learning · Computer Science 2025-10-21 Yang Ba , Mohammad Sadeq Abolhasani , Rong Pan

In this article, we study Euler characteristic techniques in topological data analysis. Pointwise computing the Euler characteristic of a family of simplicial complexes built from data gives rise to the so-called Euler characteristic…

Machine Learning · Computer Science 2024-07-25 Olympio Hacquard , Vadim Lebovici

A central problem in data-driven scientific inquiry is how to interpret structure in noisy, high-dimensional data. Topological data analysis (TDA) provides a solution via persistent homology, which encodes features of interest as…

Algebraic Topology · Mathematics 2026-02-04 Christian Lentz , Gregory Henselman-Petrusek , Lori Ziegelmeier

Increasing emphasis on data and quantitative methods in the biomedical sciences is making biological research more computational. Collecting, curating, processing, and analysing large genomic and imaging data sets poses major computational…

Quantitative Methods · Quantitative Biology 2021-09-22 Elisabeth Roesch , Joe G. Greener , Adam L. MacLean , Huda Nassar , Christopher Rackauckas , Timothy E. Holy , Michael P. H. Stumpf

This paper aims to discuss a method of quantifying the 'shape' of data, via a methodology called topological data analysis. The main tool within topological data analysis is persistent homology; this is a means of measuring the shape of…

Algebraic Topology · Mathematics 2022-09-14 Tristan Gowdridge , Nikolaos Devilis , Keith Worden

Important computational physics problems are often large-scale in nature, and it is highly desirable to have robust and high performing computational frameworks that can quickly address these problems. However, it is no trivial task to…

Mathematical Software · Computer Science 2017-09-18 J. Chang , K. B. Nakshatrala , M. G. Knepley , L. Johnsson

Recently, topological data analysis has become a trending topic in data science and engineering. However, the key technique of topological data analysis, i.e., persistent homology, is defined on point cloud data, which does not work…

Differential Geometry · Mathematics 2024-11-08 Zhe Su , Yiying Tong , Guo-Wei Wei
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