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Cis-regulatory modules (CRMs) composed of multiple transcription factor binding sites (TFBSs) control gene expression in eukaryotic genomes. Comparative genomic studies have shown that these regulatory elements are more conserved across…

Applications · Statistics 2007-09-14 Qing Zhou , Wing Hung Wong

In this paper, we propose a new deep feature selection method based on deep architecture. Our method uses stacked auto-encoders for feature representation in higher-level abstraction. We developed and applied a novel feature learning…

Machine Learning · Computer Science 2017-04-21 Milad Zafar Nezhad , Dongxiao Zhu , Xiangrui Li , Kai Yang , Phillip Levy

The performance of most emotion recognition systems degrades in real-life situations ('in the wild' scenarios) where the audio is contaminated by reverberation. Our study explores new methods to alleviate the performance degradation of SER…

Audio and Speech Processing · Electrical Eng. & Systems 2024-09-17 Ohad Cohen , Gershon Hazan , Sharon Gannot

The Hidden Quantum Markov Model (HQMM) has significant potential for analyzing time-series data and studying stochastic processes in the quantum domain as an upgrading option with potential advantages over classical Markov models. In this…

Quantum Physics · Physics 2024-11-01 Xiao-Yu Li , Qin-Sheng Zhu , Yong Hu , Hao Wu , Guo-Wu Yang , Lian-Hui Yu , Geng Chen

We search for digital biomarkers from Parkinson's Disease by observing approximate repetitive patterns matching hypothesized step and stride periodic cycles. These observations were modeled as a cycle of hidden states with randomness…

Quantitative Methods · Quantitative Biology 2017-11-15 Avinash Bukkittu , Baihan Lin , Trung Vu , Itsik Pe'er

We present a lightweight approach to sequence classification using Ensemble Methods for Hidden Markov Models (HMMs). HMMs offer significant advantages in scenarios with imbalanced or smaller datasets due to their simplicity,…

Machine Learning · Computer Science 2024-09-13 Maxime Kawawa-Beaudan , Srijan Sood , Soham Palande , Ganapathy Mani , Tucker Balch , Manuela Veloso

We introduce a revised derivation of the bitwise Markov Chain Monte Carlo (MCMC) multiple-input multiple-output (MIMO) detector. The new approach resolves the previously reported high SNR stalling problem of MCMC without the need for…

Information Theory · Computer Science 2017-07-13 Jonathan C. Hedstrom , Chung Him , Yuen , Rong-Rong Chen , Behrouz Farhang-Boroujeny

Due to the imbalanced and limited data, semi-supervised medical image segmentation methods often fail to produce superior performance for some specific tailed classes. Inadequate training for those particular classes could introduce more…

Computer Vision and Pattern Recognition · Computer Science 2022-09-02 Hritam Basak , Sagnik Ghosal , Ram Sarkar

In recent years, Cross-Modal Hashing (CMH) has aroused much attention due to its fast query speed and efficient storage. Previous literatures have achieved promising results for Cross-Modal Retrieval (CMR) by discovering discriminative hash…

Multimedia · Computer Science 2023-10-06 Kaiyi Luo , Chao Zhang , Huaxiong Li , Xiuyi Jia , Chunlin Chen

Molecular Dynamics (MD) is a powerful computational microscope for probing protein functions. However, the need for fine-grained integration and the long timescales of biomolecular events make MD computationally expensive. To address this,…

Machine Learning · Computer Science 2026-03-30 Kacper Kapuśniak , Cristian Gabellini , Michael Bronstein , Prudencio Tossou , Francesco Di Giovanni

Cardiovascular Disease (CVD) is considered as one of the principal causes of death in the world. Over recent years, this field of study has attracted researchers' attention to investigate heart sounds' patterns for disease diagnostics. In…

Machine Learning · Computer Science 2020-11-10 Mohammad Adiban , Bagher BabaAli , Saeedreza Shehnepoor

To address the complexities of spatial non-stationary (SnS) effects and spherical wave propagation in near-field channel estimation (CE) for extremely large-scale multiple-input multiple-output (XL-MIMO) systems, this paper proposes an…

Signal Processing · Electrical Eng. & Systems 2025-12-01 Shuhang Yang , Puguang An , Peng Yang , Xianbin Cao , Dapeng Oliver Wu , Tony Q. S. Quek

Structural Health Monitoring (SHM) systems are critical for monitoring aging infrastructure (such as buildings or bridges) in a cost-effective manner. Such systems typically involve collections of battery-operated wireless sensors that…

Information Theory · Computer Science 2015-06-16 Jae Young Park , Michael B. Wakin , Anna C. Gilbert

Deep fully convolutional neural network (FCN) based architectures have shown great potential in medical image segmentation. However, such architectures usually have millions of parameters and inadequate number of training samples leading to…

Computer Vision and Pattern Recognition · Computer Science 2018-01-17 Mahendra Khened , Varghese Alex Kollerathu , Ganapathy Krishnamurthi

In this work we propose a Bayesian framework for data fusion of multivariate signals which arises in imaging systems. More specifically, we consider the case where we have observed two images of the same object through two different imaging…

Data Analysis, Statistics and Probability · Physics 2007-05-23 Olivier Feron , Ali Mohammad-Djafari

We consider a Hidden Markov Model (HMM) where the integrated continuous-time Markov chain can be observed at discrete time points perturbed by a Brownian motion. The aim is to derive a filter for the underlying continuous-time Markov chain.…

Probability · Mathematics 2021-07-21 Nicole Bäuerle , Igor Gilitschenski , Uwe D. Hanebeck

Cardiovascular system diseases can be identified by using a specialized diagnostic process utilizing a digital stethoscope. Digital stethoscopes provide phonocardiography (PCG) recordings for further inspection, besides filtering and…

Signal Processing · Electrical Eng. & Systems 2024-02-21 Ibrahim Ozkan , Atila Yilmaz

Population imaging studies rely upon good quality medical imagery before downstream image quantification. This study provides an automated approach to assess image quality from cardiovascular magnetic resonance (CMR) imaging at scale. We…

Image and Video Processing · Electrical Eng. & Systems 2025-10-28 Shahabedin Nabavi , Hossein Simchi , Mohsen Ebrahimi Moghaddam , Alejandro F. Frangi , Ahmad Ali Abin

Segmentation of the heart in cardiac cine MR is clinically used to quantify cardiac function. We propose a fully automatic method for segmentation and disease classification using cardiac cine MR images. A convolutional neural network (CNN)…

Computer Vision and Pattern Recognition · Computer Science 2017-08-04 Jelmer M. Wolterink , Tim Leiner , Max A. Viergever , Ivana Isgum

Cardiovascular magnetic resonance (CMR) imaging is the gold standard for diagnosing several heart diseases due to its non-invasive nature and proper contrast. MR imaging is time-consuming because of signal acquisition and image formation…

Image and Video Processing · Electrical Eng. & Systems 2025-04-29 Kian Anvari Hamedani , Narges Razizadeh , Shahabedin Nabavi , Mohsen Ebrahimi Moghaddam