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As an emerging field, MS-based proteomics still requires software tools for efficiently storing and accessing experimental data. In this work, we focus on the management of LC-MS data, which are typically made available in standard…

Computational Engineering, Finance, and Science · Computer Science 2010-04-27 Sara Nasso , Francesco Silvestri , Francesco Tisiot , Barbara Di Camillo , Andrea Pietracaprina , Gianna Maria Toffolo

Storing digital information, ensuring the accuracy, steady and uninterrupted access to the data are considered as fundamental challenges in enterprise-class organizations and companies. In recent years, new types of storage systems such as…

Other Computer Science · Computer Science 2014-05-12 Arash Batni , Farshad Safaei

Log-Structured Merge-tree-based Key-Value Stores (LSM-KVS) have been optimized and redesigned for disaggregated storage via techniques such as compaction offloading to reduce the network I/Os between compute and storage. However, the…

Databases · Computer Science 2026-03-06 Qi Lin , Gangqi Huang , Te Guo , Chang Guo , Viraj Thakkar , Zichen Zhu , Jianguo Wang , Zhichao Cao

Long Short-Term Memory (LSTM) is the primary recurrent neural networks architecture for acoustic modeling in automatic speech recognition systems. Residual learning is an efficient method to help neural networks converge easier and faster.…

Computation and Language · Computer Science 2017-08-21 Lu Huang , Jiasong Sun , Ji Xu , Yi Yang

We present a new universal source code for distributions of unlabeled binary and ordinal trees that achieves optimal compression to within lower order terms for all tree sources covered by existing universal codes. At the same time, it…

Data Structures and Algorithms · Computer Science 2021-09-06 J. Ian Munro , Patrick K. Nicholson , Louisa Seelbach Benkner , Sebastian Wild

The dynamical phenomena of complex networks are very difficult to predict from local information due to the rich microstructures and corresponding complex dynamics. On the other hands, it is a horrible job to compute some stochastic…

Data Structures and Algorithms · Computer Science 2016-01-08 Bing Yao , Xia Liu , Jin Xu

Inducing latent tree structures from sequential data is an emerging trend in the NLP research landscape today, largely popularized by recent methods such as Gumbel LSTM and Ordered Neurons (ON-LSTM). This paper proposes FASTTREES, a new…

Computation and Language · Computer Science 2021-11-30 Bill Tuck Weng Pung , Alvin Chan

In previous work, the author introduced the B-treap, a uniquely represented B-tree analogue, and proved strong performance guarantees for it. However, the B-treap maintains complex invariants and is very complex to implement. In this paper…

Data Structures and Algorithms · Computer Science 2015-03-17 Daniel Golovin

Large language models (LLMs) have demonstrated exceptional proficiency in understanding and generating human language, but efficient inference on resource-constrained embedded devices remains challenging due to large model sizes and…

Hardware Architecture · Computer Science 2025-07-15 Weihong Xu , Haein Choi , Po-kai Hsu , Shimeng Yu , Tajana Rosing

Liquid State Machine (LSM), also known as the recurrent version of Spiking Neural Networks (SNN), has attracted great research interests thanks to its high computational power, biological plausibility from the brain, simple structure and…

Neural and Evolutionary Computing · Computer Science 2020-04-20 Shuo Tian , Lianhua Qu , Kai Hu , Nan Li , Lei Wang , Weixia Xu

Liquid State Machine (LSM) is a neural model with real time computations which transforms the time varying inputs stream to a higher dimensional space. The concept of LSM is a novel field of research in biological inspired computation with…

Neural and Evolutionary Computing · Computer Science 2019-10-09 Gideon Gbenga Oladipupo

Long Short-Term Memory (LSTM) is a well-known method used widely on sequence learning and time series prediction. In this paper we deployed stacked LSTM model in an application of weather forecasting. We propose a 2-layer spatio-temporal…

Machine Learning · Computer Science 2018-11-16 Zahra Karevan , Johan A. K. Suykens

In the present paper, we propose the model of {\it structural information learning machines} (SiLeM for short), leading to a mathematical definition of learning by merging the theories of computation and information. Our model shows that…

Machine Learning · Computer Science 2020-01-28 Angsheng Li

LSTM language models (LSTM-LMs) have been proven to be powerful and yielded significant performance improvements over count based n-gram LMs in modern speech recognition systems. Due to its infinite history states and computational load,…

Computation and Language · Computer Science 2020-10-23 Xie Chen , Sarangarajan Parthasarathy , William Gale , Shuangyu Chang , Michael Zeng

This paper presents an efficient method to perform Structured Matrix Approximation by Separation and Hierarchy (SMASH), when the original dense matrix is associated with a kernel function. Given points in a domain, a tree structure is first…

Numerical Analysis · Mathematics 2017-05-17 Difeng Cai , Edmond Chow , Yousef Saad , Yuanzhe Xi

Large language models (LLM) have achieved remarkable performance across a wide range of tasks. However, their substantial parameter sizes pose significant challenges for deployment on edge devices with limited computational and memory…

Computation and Language · Computer Science 2025-12-16 Yu-Chen Lu , Sheng-Feng Yu , Hui-Hsien Weng , Pei-Shuo Wang , Yu-Fang Hu , Liang Hung-Chun , Hung-Yueh Chiang , Kai-Chiang Wu

As data volumes continue to grow rapidly, traditional search algorithms, like the red-black tree and B+ Tree, face increasing challenges in performance, especially in big data scenarios with intensive storage access. This paper presents the…

Databases · Computer Science 2025-04-02 Songpeng Liu

We introduce the lazy search tree data structure. The lazy search tree is a comparison-based data structure on the pointer machine that supports order-based operations such as rank, select, membership, predecessor, successor, minimum, and…

Data Structures and Algorithms · Computer Science 2020-10-20 Bryce Sandlund , Sebastian Wild

Containment-based trees encompass various handy structures such as B+-trees, R-trees and M-trees. They are widely used to build data indexes, range-queryable overlays, publish/subscribe systems both in centralized and distributed contexts.…

Distributed, Parallel, and Cluster Computing · Computer Science 2012-12-17 Evangelos Bampas , Anissa Lamani , Franck Petit , Mathieu Valero

Missing data imputation is a critical challenge in various domains, such as healthcare and finance, where data completeness is vital for accurate analysis. Large language models (LLMs), trained on vast corpora, have shown strong potential…

Machine Learning · Computer Science 2025-08-26 Xinrui He , Yikun Ban , Jiaru Zou , Tianxin Wei , Curtiss B. Cook , Jingrui He