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The Levenshtein sequence reconstruction problem studies the reconstruction of a transmitted sequence from multiple erroneous copies of it. A fundamental question in this field is to determine the minimum number of erroneous copies required…

Information Theory · Computer Science 2026-01-21 Wentu Song , Kui Cai , Tony Q. S. Quek

Weak superimposed codes are combinatorial structures related closely to generalized cover-free families, superimposed codes, and disjunct matrices in that they are only required to satisfy similar but less stringent conditions. This class…

Information Theory · Computer Science 2024-09-17 Yu Tsunoda , Yuichiro Fujiwara

The Knill-Laflamme (KL) conditions distinguish exact quantum error correction codes, and it has played a critical role in the discovery of state-of-the-art codes. However, the family of exact codes is a very restrictive one and does not…

Quantum Physics · Physics 2024-06-21 Guo Zheng , Wenhao He , Gideon Lee , Liang Jiang

The set of all error-correcting codes C over a fixed finite alphabet F of cardinality q determines the set of code points in the unit square with coordinates (R(C), delta (C)):= (relative transmission rate, relative minimal distance). The…

Information Theory · Computer Science 2019-09-04 Yuri I. Manin , Matilde Marcolli

Quantum error correction (QEC) is essential for reliable quantum information processing. Targeting a particular error channel, both the encoding and the recovery channel can be optimized through a biconvex optimization to give a…

Quantum Physics · Physics 2025-05-20 Xuanhui Mao , Qian Xu , Liang Jiang

Quantum error correction plays a critical role in enabling fault-tolerant quantum computing by protecting fragile quantum information from noise. While general-purpose quantum error correction codes are designed to address a wide range of…

Quantum Physics · Physics 2025-08-26 Nirupam Basak , Andrew Tanggara , Ankith Mohan , Goutam Paul , Kishor Bharti

Binary optimal codes often contain optimal or near-optimal subcodes. In this paper we show that this is true for the family of self-dual codes. One approach is to compute the optimum distance profiles (ODPs) of linear codes, which was…

Information Theory · Computer Science 2012-10-23 Finley Freibert , Jon-Lark Kim

We give asymptotically converging semidefinite programming hierarchies of outer bounds on bilinear programs of the form $\mathrm{Tr}\big[M(X\otimes Y)\big]$, maximized with respect to semidefinite constraints on $X$ and $Y$. Applied to the…

Quantum Physics · Physics 2021-07-13 Mario Berta , Francesco Borderi , Omar Fawzi , Volkher Scholz

Locally repairable codes which are optimal with respect to the bound presented by Prakash et al. are considered. New upper bounds on the length of such optimal codes are derived. The new bounds both improve and generalize previously known…

Information Theory · Computer Science 2019-04-10 Han Cai , Ying Miao , Moshe Schwartz , Xiaohu Tang

The text-to-pattern Hamming distances problem asks to compute the Hamming distances between a given pattern of length $m$ and all length-$m$ substrings of a given text of length $n\ge m$. We focus on the $k$-mismatch version of the problem,…

Data Structures and Algorithms · Computer Science 2022-03-30 Raphaël Clifford , Paweł Gawrychowski , Tomasz Kociumaka , Daniel P. Martin , Przemysław Uznański

This study explores the self-synchronization problem in DNA coding, specifically addressing single-deletion errors without using delimiters between codewords. We aim to identify the beginning of each codeword without using delimiters,…

Information Theory · Computer Science 2026-03-31 Whan-Hyuk Choi

Insertion-deletion codes (insdel codes for short) play an important role in synchronization error correction. The higher the minimum insdel distance, the more insdel errors the code can correct. Haeupler and Shahrasbi established the…

Information Theory · Computer Science 2021-05-06 Bocong Chen , Guanghui Zhang

We construct explicitly two infinite families of genuine nonadditive 1-error correcting quantum codes and prove that their coding subspaces are 50% larger than those of the optimal stabilizer codes of the same parameters via the linear…

Quantum Physics · Physics 2009-01-15 Sixia Yu , Qing Chen , C. H. Oh

This paper investigates the approximability of the Longest Common Subsequence (LCS) problem. The fastest algorithm for solving the LCS problem exactly runs in essentially quadratic time in the length of the input, and it is known that under…

Data Structures and Algorithms · Computer Science 2021-05-10 Shyan Akmal , Virginia Vassilevska Williams

Constructing locally repairable codes achieving Singleton-type bound (we call them optimal codes in this paper) is a challenging task and has attracted great attention in the last few years. Tamo and Barg \cite{TB14} first gave a…

Information Theory · Computer Science 2017-12-14 Xudong Li , Liming Ma , Chaoping Xing

As a medium for cold data storage, DNA stands out as it promises significant gains in storage capacity and lifetime. However, it comes with its own data processing challenges to overcome. Constrained codes over the DNA alphabet…

Information Theory · Computer Science 2025-10-08 Canberk İrimağzı , Ahmed Hareedy

We study a generalization of deduplication, which enables lossless deduplication of highly similar data and show that standard deduplication with fixed chunk length is a special case. We provide bounds on the expected length of coded…

Information Theory · Computer Science 2020-03-04 Rasmus Vestergaard , Qi Zhang , Daniel E. Lucani

Motivated by DNA-based data storage, we investigate a system where digital information is stored in an unordered set of several vectors over a finite alphabet. Each vector begins with a unique index that represents its position in the whole…

Information Theory · Computer Science 2019-01-23 Andreas Lenz , Paul H. Siegel , Antonia Wachter-Zeh , Eitan Yaakobi

Based on the theoretical neuroscience, G. Cotardo and A. Ravagnavi in \cite{CR} introduced a kind of asymmetric binary codes called combinatorial neural codes (CN codes for short), with a "matched metric" $\delta_{r}$ called asymmetric…

Information Theory · Computer Science 2021-12-16 Aixian Zhang , Xiaoyan Jin , Keqin Feng

We attempt to recover an $n$-dimensional vector observed in white noise, where $n$ is large and the vector is known to be sparse, but the degree of sparsity is unknown. We consider three different ways of defining sparsity of a vector:…

Statistics Theory · Mathematics 2007-06-13 Felix Abramovich , Yoav Benjamini , David L. Donoho , Iain M. Johnstone