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Contacts between individuals serve as pathways where infections may propagate. These contact patterns can be represented by network structures. Static structures have been the common modeling paradigm but recent results suggest that…

Populations and Evolution · Quantitative Biology 2012-04-25 Luis Enrique Correa Rocha , Adeline Decuyper , Vincent D Blondel

A simple, but ``classical``, stochastic model for epidemic spread in a finite, but large, population is studied. The progress of the epidemic can be divided into three different phases that requires different tools to analyse. Initially the…

Populations and Evolution · Quantitative Biology 2018-05-29 Åke Svensson

The long duration of the COVID-19 pandemic allowed for multiple bursts in the infection and death rates, the so-called epidemic waves. This complex behavior is no longer tractable by simple compartmental model and requires more…

The study of epidemic spreading on populations of networked individuals has seen recently a great deal of significant progresses. A common point of all past studies is, however, that there is only one peak of infected density in each single…

Physics and Society · Physics 2018-05-09 Muhua Zheng , Wei Wang , Ming Tang , Jie Zhou , S. Boccaletti , Zonghua Liu

The acute phase of the Covid-19 pandemic has made apparent the need for decision support based upon accurate epidemic modeling. This process is substantially hampered by under-reporting of cases and related data incompleteness issues. In…

Applications · Statistics 2026-03-10 Anastasios Apsemidis , Nikolaos Demiris

We present a modified diffusive epidemic process that has a finite threshold on scale-free graphs. The diffusive epidemic process describes the epidemic spreading in a non-sedentary population, and it is a reaction-diffusion process. In the…

Epidemic disease spreading is conventionally often modelled and analyzed by means of rate and diffusion equations, following the paradigms of well-controlled chemical reactions and diffusive dynamics in a test tube. Yet, serious worries…

Physics and Society · Physics 2023-01-03 Klaus Kroy

can evolve simultaneously. For the information-driven adaptive process, susceptible (infected) individuals who have abilities to recognize the disease would break the links of their infected (susceptible) neighbors to prevent the epidemic…

Physics and Society · Physics 2015-05-20 Xiu-Xiu Zhan , Chuang Liu , Gui-Quan Sun , Zi-Ke Zhang

Deterministic compartmental models have been used extensively in modeling epidemic propagation. These models are required to fit available data and numerical procedures are often implemented to this end. But not every model architecture is…

Populations and Evolution · Quantitative Biology 2021-11-23 Gabriel Turinici

This article introduces epidemia, an R package for Bayesian, regression-oriented modeling of infectious diseases. The implemented models define a likelihood for all observed data while also explicitly modeling transmission dynamics: an…

The wavelet tree has become a very useful data structure to efficiently represent and query large volumes of data in many different domains, from bioinformatics to geographic information systems. One problem with wavelet trees is their…

Data Structures and Algorithms · Computer Science 2016-10-20 José Fuentes-Sepúlveda , Erick Elejalde , Leo Ferres , Diego Seco

The spread of viruses in biological networks, computer networks, and human contact networks can have devastating effects; developing and analyzing mathematical models of these systems can be insightful and lead to societal benefits. Prior…

Optimization and Control · Mathematics 2016-09-19 Philip E. Paré , Angelia Nedić , Carolyn L. Beck

We study the diffusion of epidemics on networks that are partitioned into local communities. The gross structure of hierarchical networks of this kind can be described by a quotient graph. The rationale of this approach is that individuals…

Social and Information Networks · Computer Science 2016-01-19 Stefano Bonaccorsi , Stefania Ottaviano , Delio Mugnolo , Francesco De Pellegrini

In the paper, we present an incremental approach in the construction of scale free networks with hidden variables. The work arises from the necessity to generate that type of networks with a given number of links instead of obtaining a…

Disordered Systems and Neural Networks · Physics 2021-06-10 Fabio Vanni

Capturing the structured mixing within a population is key to the reliable projection of infectious disease dynamics and hence informed control. Both heterogeneity in the number of contacts and age-structured mixing have been repeatedly…

Social and Information Networks · Computer Science 2026-03-17 Luke Murray Kearney , Emma L Davis , Matt J Keeling

Epidemic spreading can be suppressed by the introduction of containment measures such as social distancing and lock downs. Yet, when such measures are relaxed, new epidemic waves and infection cycles may occur. Here we explore this issue in…

Physics and Society · Physics 2020-12-07 Fabio Caccioli , Daniele De Martino

Research in epidemiology often focusses on designing interventions that result in the number of infected individuals asymptotically approaching zero, without considering that this number may peak at high values during transients. Recent…

Optimization and Control · Mathematics 2020-03-24 Willem Esterhuizen , Tim Aschenbruck , Jean Lévine , Stefan Streif

The last few years have seen remarkably fast progress in the understanding of statistics and epidemic dynamics of various clustered networks. This paper considers a class of networks based around a concept (the locale) that allows…

Populations and Evolution · Quantitative Biology 2012-10-03 Thomas House

In this work we study a model of tax evasion. We considered a fixed population divided in three compartments, namely honest tax payers, tax evaders and a third class between the mentioned two, which we call \textit{susceptibles} to become…

Physics and Society · Physics 2017-05-24 Rafael M. Brum , Nuno Crokidakis

Given a suitably large and well connected (complex) graph state, any quantum algorithm can be implemented purely through local measurements on the individual qubits. Measurements can also be used to create the graph state: Path erasure…

Quantum Physics · Physics 2009-06-09 Earl T. Campbell , Joseph Fitzsimons , Simon C. Benjamin , Pieter Kok