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We present a cross-linguistic study that aims to quantify vowel harmony using data-driven computational modeling. Concretely, we define an information-theoretic measure of harmonicity based on the predictability of vowels in a natural…

Computation and Language · Computer Science 2023-08-10 Julius Steuer , Badr Abdullah , Johann-Mattis List , Dietrich Klakow

Supporting learners' understanding of taught skills in online settings is a longstanding challenge. While exercises and chat-based agents can evaluate understanding in limited contexts, this challenge is magnified when learners seek…

Artificial Intelligence · Computer Science 2025-04-11 Rahul K. Dass , Rochan H. Madhusudhana , Erin C. Deye , Shashank Verma , Timothy A. Bydlon , Grace Brazil , Ashok K. Goel

Amortized simulation-based inference (SBI) methods train neural networks on simulated data to perform Bayesian inference. While this strategy avoids the need for tractable likelihoods, it often requires a large number of simulations and has…

Machine Learning · Computer Science 2025-03-04 Manuel Gloeckler , Shoji Toyota , Kenji Fukumizu , Jakob H. Macke

As the large amount of sequencing data accumulated in past decades and it is still accumulating, we need to handle the more and more sequencing data. As the fast development of the computing technologies, we now can handle a large amount of…

Other Quantitative Biology · Quantitative Biology 2021-01-05 Songting Shi

Information theory provides tools to predict the performance of a learning algorithm on a given dataset. For instance, the accuracy of learning an unknown parameter can be upper bounded by reducing the learning task to hypothesis testing…

Quantum Physics · Physics 2026-04-21 Evan Peters

Experiments that study neural encoding of stimuli at the level of individual neurons typically choose a small set of features present in the world --- contrast and luminance for vision, pitch and intensity for sound --- and assemble a…

Machine Learning · Statistics 2016-11-22 Xin , Chen , Jeffrey M Beck , John M Pearson

Fluctuations in biochemical networks, e.g., in a living cell, have a complex origin that precludes a description of such systems in terms of bipartite or multipartite processes, as is usually done in the framework of stochastic and/or…

Statistical Mechanics · Physics 2020-01-29 R. Chétrite , M. L. Rosinberg , T. Sagawa , G. Tarjus

This paper considers the problem of distributed estimation in a sensor network, where multiple sensors are deployed to infer the state of a linear time-invariant (LTI) Gaussian system. By proposing a lossless decomposition of Kalman filter,…

Systems and Control · Electrical Eng. & Systems 2022-04-19 Jiaqi Yan , Yilin Mo , Hideaki Ishii

Understanding the dynamical behavior of complex systems is of exceptional relevance in everyday life, from biology to economy. In order to describe the dynamical organization of complex systems, existing methods require the knowledge of the…

Adaptation and Self-Organizing Systems · Physics 2017-03-07 Marco Fiorucci

Statistical models are often defined by a generative process for simulating synthetic data, but this can lead to intractable likelihoods. Likelihood free inference (LFI) methods enable Bayesian inference to be performed in this case.…

Methodology · Statistics 2025-06-05 David Chen , Xinwei Li , Eui-Jin Kim , Prateek Bansal , David Nott

We introduce a novel large language model (LLM)-driven agent framework, which iteratively refines queries and filters contextual evidence by leveraging dynamically evolving knowledge. A defining feature of the system is its decoupling of…

Artificial Intelligence · Computer Science 2025-04-02 Seyoung Song

Solving mathematical reasoning problems requires not only accurate access to relevant knowledge but also careful, multi-step thinking. However, current retrieval-augmented models often rely on a single perspective, follow inflexible search…

Artificial Intelligence · Computer Science 2025-11-03 Ali Asgarov , Umid Suleymanov , Aadyant Khatri

Since proposed, spiking neural networks (SNNs) gain recognition for their high performance, low power consumption and enhanced biological interpretability. However, while bringing these advantages, the binary nature of spikes also leads to…

Neural and Evolutionary Computing · Computer Science 2024-07-09 Yongjun Xiao , Xianlong Tian , Yongqi Ding , Pei He , Mengmeng Jing , Lin Zuo

Multi-modal semantic segmentation significantly enhances AI agents' perception and scene understanding, especially under adverse conditions like low-light or overexposed environments. Leveraging additional modalities (X-modality) like…

Computer Vision and Pattern Recognition · Computer Science 2025-09-11 Zifu Wan , Pingping Zhang , Yuhao Wang , Silong Yong , Simon Stepputtis , Katia Sycara , Yaqi Xie

Personalized AI assistants often struggle to incorporate complex personal data and causal knowledge, leading to generic advice that lacks explanatory power. We propose REMI, a Causal Schema Memory architecture for a multimodal lifestyle…

Artificial Intelligence · Computer Science 2025-09-09 Vishal Raman , Vijai Aravindh R , Abhijith Ragav

Single-cell technologies have revolutionized biomedical research by enabling scalable measurement of the genome, transcriptome, and proteome of multiple systems at single-cell resolution. Now widely applied to cancer models, these assays…

Genomics · Quantitative Biology 2020-05-05 Allen W Zhang , Kieran R Campbell

Objective: A variety of pattern analysis techniques for model training in brain interfaces exploit neural feature dimensionality reduction based on feature ranking and selection heuristics. In the light of broad evidence demonstrating the…

Machine Learning · Computer Science 2019-04-08 Ozan Ozdenizci , Deniz Erdogmus

The application of single-cell molecular profiling coupled with spatial technologies has enabled charting cellular heterogeneity in reference tissues and in disease. This new wave of molecular data has highlighted the expected diversity of…

Tissues and Organs · Quantitative Biology 2024-03-12 Ricardo Omar Ramirez Flores , Philipp Sven Lars Schäfer , Leonie Küchenhoff , Julio Saez-Rodriguez

Information theory is a powerful framework for quantifying complexity, uncertainty, and dynamical structure in time-series data, with widespread applicability across disciplines such as physics, finance, and neuroscience. However, the…

Information Theory · Computer Science 2026-01-26 Annie G. Bryant , Oliver M. Cliff , James M. Shine , Ben D. Fulcher , Joseph T. Lizier

Studies investigating neural information processing often implicitly ask both, which processing strategy out of several alternatives is used and how this strategy is implemented in neural dynamics. A prime example are studies on predictive…