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Inferring cluster structure in microarray datasets is a fundamental task for the -omic sciences. A fundamental question in Statistics, Data Analysis and Classification, is the prediction of the number of clusters in a dataset, usually…

Data Structures and Algorithms · Computer Science 2011-02-16 Filippo Utro

For a given graph $H$, its subdivisions carry the same topological structure. The existence of $H$-subdivisions within a graph $G$ has deep connections with topological, structural and extremal properties of $G$. One prominent example of…

Combinatorics · Mathematics 2023-08-22 Seonghyuk Im , Jaehoon Kim , Younjin Kim , Hong Liu

One of the fundamental open problems in the area of distributed graph algorithms is the question of whether randomization is needed for efficient symmetry breaking. While there are fast, $\text{poly}\log n$-time randomized distributed…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-05-29 Philipp Bamberger , Mohsen Ghaffari , Fabian Kuhn , Yannic Maus , Jara Uitto

Hypergraphs are a useful abstraction for modeling multiway relationships in data, and hypergraph clustering is the task of detecting groups of closely related nodes in such data. Graph clustering has been studied extensively, and there are…

Data Structures and Algorithms · Computer Science 2020-07-02 Nate Veldt , Austin R. Benson , Jon Kleinberg

This paper studies clustering algorithms for dynamically evolving graphs $\{G_t\}$, in which new edges (and potential new vertices) are added into a graph, and the underlying cluster structure of the graph can gradually change. The paper…

Data Structures and Algorithms · Computer Science 2024-06-06 Steinar Laenen , He Sun

Constructing a spanning tree of a graph is one of the most basic tasks in graph theory. We consider this problem in the setting of local algorithms: one wants to quickly determine whether a given edge $e$ is in a specific spanning tree,…

Data Structures and Algorithms · Computer Science 2021-04-28 Reut Levi , Dana Ron , Ronitt Rubinfeld

Given a graph $G = (V,E)$ with vertex weights $w(v)$ and a desired number of parts $k$, the goal in graph partitioning problems is to partition the vertex set V into parts $V_1,\ldots,V_k$. Metrics for compactness, contiguity, and balance…

Data Structures and Algorithms · Computer Science 2021-02-10 Cyrus Hettle , Shixiang Zhu , Swati Gupta , Yao Xie

In the {\sc Cluster Deletion} problem the goal is to remove the minimum number of edges of a given graph, such that every connected component of the resulting graph constitutes a clique. It is known that the decision version of {\sc Cluster…

Data Structures and Algorithms · Computer Science 2019-04-23 Athanasios L. Konstantinidis , Charis Papadopoulos

A set $D\subseteq V$ of a graph $G=(V,E)$ is called a restrained dominating set of $G$ if every vertex not in $D$ is adjacent to a vertex in $D$ and to a vertex in $V \setminus D$. The \textsc{Minimum Restrained Domination} problem is to…

Discrete Mathematics · Computer Science 2016-06-09 Arti Pandey , B. S. Panda

In this paper, we consider the problem of clustering graph nodes and sparsifying graph edges over distributed graphs, when graph edges with possibly edge duplicates are observed at physically remote sites. Although edge duplicates across…

Data Structures and Algorithms · Computer Science 2023-02-21 Chun Jiang Zhu

A $k$-truss is an edge-induced subgraph $H$ such that each of its edges belongs to at least $k-2$ triangles of $H$. This notion has been introduced around ten years ago in social network analysis and security, as a form of cohesive subgraph…

Data Structures and Algorithms · Computer Science 2020-10-05 Alessio Conte , Roberto Grossi , Andrea Marino , Luca Versari

Analyzing large graph data is an essential part of many modern applications, such as social networks. Due to its large computational complexity, distributed processing is frequently employed. This requires graph data to be divided across…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-09-12 YoungJoon Park , DongKyu Lee , Tien-Cuong Bui

Modern graph or network datasets often contain rich structure that goes beyond simple pairwise connections between nodes. This calls for complex representations that can capture, for instance, edges of different types as well as so-called…

Social and Information Networks · Computer Science 2020-02-19 Ilya Amburg , Nate Veldt , Austin R. Benson

We study which property testing and sublinear time algorithms can be transformed into graph streaming algorithms for random order streams. Our main result is that for bounded degree graphs, any property that is constant-query testable in…

Data Structures and Algorithms · Computer Science 2017-07-25 Morteza Monemizadeh , S. Muthukrishnan , Pan Peng , Christian Sohler

How can we find a good graph clustering of a real-world network, that allows insight into its underlying structure and also potential functions? In this paper, we introduce a new graph clustering algorithm Dcut from a density point of view.…

Social and Information Networks · Computer Science 2016-06-06 Junming Shao , Qinli Yang , Jinhu Liu , Stefan Kramer

We consider the problem of clustering mixtures of mean-separated Gaussians in high dimensions. We are given samples from a mixture of $k$ identity covariance Gaussians, so that the minimum pairwise distance between any two pairs of means is…

Data Structures and Algorithms · Computer Science 2021-12-02 Jerry Li , Allen Liu

We consider the problem of spectral clustering under group fairness constraints, where samples from each sensitive group are approximately proportionally represented in each cluster. Traditional fair spectral clustering (FSC) methods…

Machine Learning · Computer Science 2023-11-27 Xiang Zhang , Qiao Wang

Graph coloring is fundamental to distributed computing. We give the first sub-logarithmic distributed algorithm for coloring cluster graphs. These graphs are obtained from the underlying communication network by contracting nodes and edges,…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-06-17 Maxime Flin , Magnus M. Halldorsson , Alexandre Nolin

Exact pattern matching in labeled graphs is the problem of searching paths of a graph $G=(V,E)$ that spell the same string as the pattern $P[1..m]$. This basic problem can be found at the heart of more complex operations on variation graphs…

Computational Complexity · Computer Science 2020-06-04 Massimo Equi , Roberto Grossi , Veli Mäkinen

Effective resistances are ubiquitous in graph algorithms and network analysis. In this work, we study sublinear time algorithms to approximate the effective resistance of an adjacent pair $s$ and $t$. We consider the classical adjacency…

Data Structures and Algorithms · Computer Science 2023-07-06 Dongrun Cai , Xue Chen , Pan Peng