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We present analysis of a novel tool for protein secondary structure prediction using the recently-investigated Neural Machine Translation framework. The tool provides a fast and accurate folding prediction based on primary structure with…

Quantitative Methods · Quantitative Biology 2021-05-11 Evan Weissburg , Ian Bulovic

The task of translating between programming languages differs from the challenge of translating natural languages in that programming languages are designed with a far more rigid set of structural and grammatical rules. Previous work has…

Machine Learning · Computer Science 2018-07-06 Mehdi Drissi , Olivia Watkins , Aditya Khant , Vivaswat Ojha , Pedro Sandoval , Rakia Segev , Eric Weiner , Robert Keller

In typical neural machine translation~(NMT), the decoder generates a sentence word by word, packing all linguistic granularities in the same time-scale of RNN. In this paper, we propose a new type of decoder for NMT, which splits the decode…

Computation and Language · Computer Science 2017-05-04 Hao Zhou , Zhaopeng Tu , Shujian Huang , Xiaohua Liu , Hang Li , Jiajun Chen

Introducing explicit constraints on the structural predictions has been an effective way to improve the performance of semantic segmentation models. Existing methods are mainly based on insufficient hand-crafted rules that only partially…

Computer Vision and Pattern Recognition · Computer Science 2019-07-30 Boxi Wu , Shuai Zhao , Wenqing Chu , Zheng Yang , Deng Cai

Pre-trained language models (PrLM) have to carefully manage input units when training on a very large text with a vocabulary consisting of millions of words. Previous works have shown that incorporating span-level information over…

Computation and Language · Computer Science 2021-09-16 Rongzhou Bao , Zhuosheng Zhang , Hai Zhao

The scarcity of large parallel corpora is an important obstacle for neural machine translation. A common solution is to exploit the knowledge of language models (LM) trained on abundant monolingual data. In this work, we propose a novel…

Computation and Language · Computer Science 2020-10-27 Christos Baziotis , Barry Haddow , Alexandra Birch

Recent years have seen a paradigm shift in NLP towards using pretrained language models ({PLM}) for a wide range of tasks. However, there are many difficult design decisions to represent structures (e.g. tagged text, coreference chains) in…

Computation and Language · Computer Science 2022-11-18 Tianyu Liu , Yuchen Jiang , Nicholas Monath , Ryan Cotterell , Mrinmaya Sachan

Large-scale language models (LMs) pretrained on massive corpora of text, such as GPT-2, are powerful open-domain text generators. However, as our systematic examination reveals, it is still challenging for such models to generate coherent…

Computation and Language · Computer Science 2021-04-15 Bowen Tan , Zichao Yang , Maruan AI-Shedivat , Eric P. Xing , Zhiting Hu

This paper is devoted to the prediction of solutions to a stochastic discrete optimization problem. Through an application, we illustrate how we can use a state-of-the-art neural machine translation (NMT) algorithm to predict the solutions…

Machine Learning · Computer Science 2019-10-21 Emma Frejinger , Eric Larsen

Structural kernels are a flexible learning paradigm that has been widely used in Natural Language Processing. However, the problem of model selection in kernel-based methods is usually overlooked. Previous approaches mostly rely on setting…

Computation and Language · Computer Science 2015-08-11 Daniel Beck , Trevor Cohn , Christian Hardmeier , Lucia Specia

Recent advances in data-to-text generation have led to the use of large-scale datasets and neural network models which are trained end-to-end, without explicitly modeling what to say and in what order. In this work, we present a neural…

Computation and Language · Computer Science 2019-04-15 Ratish Puduppully , Li Dong , Mirella Lapata

Effectively parsing the facade is essential to 3D building reconstruction, which is an important computer vision problem with a large amount of applications in high precision map for navigation, computer aided design, and city generation…

Computer Vision and Pattern Recognition · Computer Science 2021-06-03 Hantang Liu , Wentong Li , Jianke Zhu

Word ordering is a constrained language generation task taking unordered words as input. Existing work uses linear models and neural networks for the task, yet pre-trained language models have not been studied in word ordering, let alone…

Computation and Language · Computer Science 2022-10-31 Zebin Ou , Meishan Zhang , Yue Zhang

Recent large language models (LLMs) have demonstrated remarkable performance on a variety of natural language processing (NLP) tasks, leading to intense excitement about their applicability across various domains. Unfortunately, recent work…

Computation and Language · Computer Science 2023-02-13 Yaqi Xie , Chen Yu , Tongyao Zhu , Jinbin Bai , Ze Gong , Harold Soh

Most machine translation systems generate text autoregressively from left to right. We, instead, use a masked language modeling objective to train a model to predict any subset of the target words, conditioned on both the input text and a…

Computation and Language · Computer Science 2019-09-05 Marjan Ghazvininejad , Omer Levy , Yinhan Liu , Luke Zettlemoyer

Deep learning has recently made remarkable progress in natural language processing. Yet, the resulting algorithms remain far from competing with the language abilities of the human brain. Predictive coding theory offers a potential…

Neurons and Cognition · Quantitative Biology 2021-11-30 Charlotte Caucheteux , Alexandre Gramfort , Jean-Remi King

Translating in real-time, a.k.a. simultaneous translation, outputs translation words before the input sentence ends, which is a challenging problem for conventional machine translation methods. We propose a neural machine translation (NMT)…

Computation and Language · Computer Science 2017-01-12 Jiatao Gu , Graham Neubig , Kyunghyun Cho , Victor O. K. Li

Neural Machine Translation (NMT) generates target words sequentially in the way of predicting the next word conditioned on the context words. At training time, it predicts with the ground truth words as context while at inference it has to…

Computation and Language · Computer Science 2019-06-18 Wen Zhang , Yang Feng , Fandong Meng , Di You , Qun Liu

Continuous-output neural machine translation (CoNMT) replaces the discrete next-word prediction problem with an embedding prediction. The semantic structure of the target embedding space (i.e., closeness of related words) is intuitively…

Computation and Language · Computer Science 2024-04-03 Evgeniia Tokarchuk , Vlad Niculae

We introduce a neural machine translation model that views the input and output sentences as sequences of characters rather than words. Since word-level information provides a crucial source of bias, our input model composes representations…

Computation and Language · Computer Science 2015-11-17 Wang Ling , Isabel Trancoso , Chris Dyer , Alan W Black
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