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Cellular Agent-Based Models are commonly employed to describe a variety biological systems. Over the course of the past years, many modeling tools have emerged which solve particular research questions. In this short opinion piece, we argue…

Cell Behavior · Quantitative Biology 2025-11-18 Jonas Pleyer

We study the dynamics of the Rule 150 reversible cellular automaton (RCA). This is a one-dimensional lattice system of binary variables with synchronous (Floquet) dynamics, corresponding to a bulk deterministic and reversible discrete…

Statistical Mechanics · Physics 2022-04-06 Joseph W. P. Wilkinson , Tomaž Prosen , Juan P. Garrahan

In this article, we present a framework for designing neural networks that remain consistent with the underlying principles of agent-based models. We begin by highlighting the limitations of standard neural differential equations in…

Machine Learning · Computer Science 2025-12-10 Nino Antulov-Fantulin

A general mathematical method is presented for the systematic construction of coupled map lattices (CMLs) out of deterministic cellular automata (CAs). The entire CA rule space is addressed by means of a universal map for CAs that we have…

Cellular Automata and Lattice Gases · Physics 2016-06-09 Vladimir García-Morales

Cellular automata (CA) are well-studied models of decentralized parallel computation, known for their ability to exhibit complex global behavior from simple local rules. While their dynamics have been widely explored through simulations, a…

Formal Languages and Automata Theory · Computer Science 2025-11-18 Dana Fisman , Noa Izsak

Can we quantify the change of complexity throughout evolutionary processes? We attempt to address this question through an empirical approach. In very general terms, we simulate two simple organisms on a computer that compete over limited…

Neural and Evolutionary Computing · Computer Science 2016-01-05 Alyssa Adams , Hector Zenil , Eduardo Hermo Reyes , Joost Joosten

The emergence of complex behaviors in cellular automata is an area that has been widely developed in recent years with the intention to generate and analyze automata that produce space-moving patterns or gliders that interact in a periodic…

The cellular automata (CA) approach to traffic modeling is extended to allow for spatially homogeneous steady state solutions that cover a two dimensional region in the flow-density plane. Hence these models fulfill a basic postulate of a…

Statistical Mechanics · Physics 2009-11-07 Boris S. Kerner , Sergey L. Klenov , Dietrich E. Wolf

Neural cellular automata (Neural CA) are a recent framework used to model biological phenomena emerging from multicellular organisms. In these systems, artificial neural networks are used as update rules for cellular automata. Neural CA are…

Neural and Evolutionary Computing · Computer Science 2021-07-13 Alexandre Variengien , Stefano Nichele , Tom Glover , Sidney Pontes-Filho

We show techniques of analyzing complex dynamics of cellular automata (CA) with chaotic behaviour. CA are well known computational substrates for studying emergent collective behaviour, complexity, randomness and interaction between order…

Cellular Automata and Lattice Gases · Physics 2012-03-29 Genaro J. Martinez , Andrew Adamatzky , Ramon Alonso-Sanz

Locally interacting dynamical systems, such as epidemic spread, rumor propagation through crowd, and forest fire, exhibit complex global dynamics originated from local, relatively simple, and often stochastic interactions between dynamic…

Systems and Control · Electrical Eng. & Systems 2024-05-29 Beomseok Kang , Harshit Kumar , Minah Lee , Biswadeep Chakraborty , Saibal Mukhopadhyay

Agent-based modeling is a computational dynamic modeling technique that may be less familiar to some readers. Agent-based modeling seeks to understand the behaviour of complex systems by situating agents in an environment and studying the…

Multiagent Systems · Computer Science 2023-04-19 G. Wade McDonald , Nathaniel D. Osgood

The fundamental understanding of how cells physically interact with each other and their environment is key to understanding their organisation in living tissues. Over the past decades several computational methods have been developed to…

Quantitative Methods · Quantitative Biology 2026-01-22 Paul Van Liedekerke , Jiří Pešek , Kevin Alessandri , Dirk Drasdo

We present a diagrammatic method to build up sophisticated cellular automata (CAs) as models of complex physical systems. The diagrams complement the mathematical approach to CA modeling, whose details are also presented here, and allow CAs…

Cellular Automata and Lattice Gases · Physics 2018-04-03 Vladimir García-Morales

The density classification problem is one of the simplest yet non-trivial computing tasks which seem to be ideally suitable for cellular automata (CA). Unfortunately, there exists no one-dimensional two-state CA which classifies binary…

Cellular Automata and Lattice Gases · Physics 2016-02-18 Henryk Fukś

We study the predictability of emergent phenomena in complex systems. Using nearest neighbor, one-dimensional Cellular Automata (CA) as an example, we show how to construct local coarse-grained descriptions of CA in all classes of Wolfram's…

Cellular Automata and Lattice Gases · Physics 2015-06-26 Navot Israeli , Nigel Goldenfeld

Agent-based modeling is a paradigm of modeling dynamic systems of interacting agents that are individually governed by specified behavioral rules. Training a model of such agents to produce an emergent behavior by specification of the…

Machine Learning · Computer Science 2019-10-11 Karan K. Budhraja , Hang Gao , Tim Oates

Agent-Based Models (ABMs) are powerful tools for studying emergent properties in complex systems. In ABMs, agent behaviors are governed by local interactions and stochastic rules. However, these rules are, in general, non-differentiable,…

Artificial Intelligence · Computer Science 2025-11-27 Francesco Cozzi , Marco Pangallo , Alan Perotti , André Panisson , Corrado Monti

Cellular automata (CA) exemplify systems where simple local interaction rules can lead to intricate and complex emergent phenomena at large scales. The various types of dynamical behavior of CA are usually categorized empirically into…

Cellular Automata and Lattice Gases · Physics 2024-06-10 Wout Merbis , Calvin Bakker

In this paper, we give an elaborate and understandable review of traffic cellular automata (TCA) models, which are a class of computationally efficient microscopic traffic flow models. TCA models arise from the physics discipline of…

Physics and Society · Physics 2007-05-23 Sven Maerivoet , Bart De Moor