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It is well known that, under suitable conditions, microRNAs are able to fine tune the relative concentration of their targets to any desired value. We show that this function is particularly effective when one of the targets is a…

Molecular Networks · Quantitative Biology 2015-06-16 Andrea Riba , Carla Bosia , Mariama El Baroudi , Laura Ollino , Michele Caselle

The size of mature oocytes is similar across mammalian species, yet the size of ovarian follicles increases with species size, with some ovarian follicles reaching diameters more than 1000-fold the size of the enclosed oocyte. Here we show…

Tissues and Organs · Quantitative Biology 2013-11-14 M. Bächler , D. Menshykau , Ch. De Geyter , D. Iber

Objective: We hypothesized that prenatal stress (PS) exerts lasting impact on fetal heart rate (fHR). We sought to validate the presence of such PS signature in fHR by measuring coupling between maternal HR (mHR) and fHR. Study design:…

The binding of basic fibroblast growth factor (FGF-2) to its cell surface receptor (CSR) and subsequent signal transduction is known to be enhanced by Heparan Sulfate Proteoglycans (HSPGs). HSPGs bind FGF-2 with low affinity and likely…

Statistical Mechanics · Physics 2007-05-23 Manoj Gopalakrishnan , Kimberly Forsten-Williams , Uwe C. Tauber

We report the analysis of activation by corticosteroids and progesterone of full-length mineralocorticoid receptor (MR) from elephant shark, a cartilaginous fish belonging to the oldest group of jawed vertebrates. Based on their measured…

In this paper, we study an excitable, biophysical system that supports wave propagation of nerve impulses. We consider a slow-fast, FitzHugh-Rinzel neuron model where only the membrane voltage interacts diffusively, giving rise to the…

Chaotic Dynamics · Physics 2021-11-03 A. Mondal , A. Mondal , S. Kumar Sharma , R. Kumar Upadhyay , C. G. Antonopoulos

Transforming growth factor beta (TGF$\beta$) plays a central role in morphogenesis, growth, and cell differentiation. This cytokine is particularly important in cartilage where it regulates cell proliferation and extracellular matrix…

Tissues and Organs · Quantitative Biology 2015-05-27 Catherine Baugé , Olivier Cauvard , Sylvain Leclercq , Philippe Galéra , Karim Boumédiene

Mitochondrial research is important to ageing, apoptosis, and mitochondrial diseases. In previous works, mitochondria are usually stimulated indirectly by proapoptotic drugs to study mitochondrial development, which is in lack of…

Subcellular Processes · Quantitative Biology 2015-02-18 Yintao Wang , Hao He , Shaoyang Wang , Yaohui Liu , Minglie Hu , Youjia Cao , Chingyue Wang

We propose a mathematical model allowing for the alternating pulse and surge pattern of GnRH (Gonadotropin Releasing Hormone) secretion. The model is based on the coupling between two systems running on different time scales. The faster…

Tissues and Organs · Quantitative Biology 2007-07-12 Frederique Clement , Jean-Pierre Francoise

Self-regulatory models are common in nature, as described e.g. in (\cite{mur}), (\cite{ha}) and (\cite{Gb}).\\ Let us consider a system made up of a number of glands as a motivation. Each gland secretes a hormone that allows secretion in…

Dynamical Systems · Mathematics 2016-10-28 Pablo Amster , Carlos Alliera

Working memory (WM) allows information to be stored and manipulated over short time scales. Performance on WM tasks is thought to be supported by the frontoparietal system (FPS), the default mode system (DMS), and interactions between them.…

Neurons and Cognition · Quantitative Biology 2020-09-09 Andrew C. Murphy , Maxwell A. Bertolero , Lia Papadopoulos , David M. Lydon-Staley , Danielle S. Bassett

We derive the SFH of MS galaxies showing how the SFH peak of a galaxy depends on its seed mass at e.g. z=5. Following the MS, galaxies undergo a drastic slow down of their stellar mass growth after reaching the peak of their SFH. According…

Astrophysics of Galaxies · Physics 2017-12-20 Laure Ciesla , David Elbaz , Jeremy Fensch

Thyroid hormone (TH) signalling, an evolutionary conserved pathway, is crucial for brain function and cognition throughout life, from early development to ageing. In humans, TH deficiency during pregnancy alters offspring brain development,…

Subcellular Processes · Quantitative Biology 2019-05-10 Jean-David Gothié , Barbara Demeneix , Sylvie Remaud

Auxin is considered one of the cardinal hormones in plant growth and development. It regulates a wide range of processes throughout the plant. Synthetic auxins exploit the auxin-signalling pathway and are valuable as herbicidal…

G protein-coupled receptors (GPCRs) represent a diverse and vital family of membrane proteins that mediate intracellular signaling in response to extracellular stimuli, playing critical roles in physiology and disease. Traditionally…

Biological Physics · Physics 2025-06-04 Aakanksha J Shetty , Alexei Sirbu , Paolo Annibale

In this work, we describe a computational framework for the genome-wide identification and characterization of mixed transcriptional/post-transcriptional regulatory circuits in humans. We concentrated in particular on feed-forward loops…

Genomics · Quantitative Biology 2009-07-24 Angela Re , Davide Cora' , Daniela Taverna , Michele Caselle

Retinoic acid receptor (RAR) is a ligand-dependent transcription factor that regulates the expression of genes involved in cell growth, differentiation, and development. Binding of the retinoic acid hormone to RAR is accompanied by…

Biological Physics · Physics 2009-10-31 Dorina Kosztin , Sergei Izrailev , Klaus Schulten

There is much concern about disruption of endocrine physiology regulated by steroid hormones in humans, other terrestrial vertebrates and fish by industrial chemicals, such as bisphenol A, and pesticides, such as DDT. These…

Biomolecules · Quantitative Biology 2021-11-23 Michael E. Baker

Brain operates at remarkably low signal power. It has been noted that noise may play a constructive role in neural networks and facilitate the subthreshold signaling. The process of spiking pattern excitation at the characteristic neuronal…

Neurons and Cognition · Quantitative Biology 2024-08-12 Mariia Sorokina

In Dou et al. (2021), we introduced the Fundamental Formation Relation (FFR), a tight relation between specific SFR (sSFR), H$_2$ star formation efficiency (SFE$_{\rm H_2}$), and the ratio of H$_2$ to stellar mass. Here we show that atomic…