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Phylogenetic trees are a central tool in understanding evolution. They are typically inferred from sequence data, and capture evolutionary relationships through time. It is essential to be able to compare trees from different data sources…

Populations and Evolution · Quantitative Biology 2017-10-31 Michelle Kendall , Caroline Colijn

We consider a class of random loop models (including the random interchange process) that are parametrised by a time parameter $\beta\geq 0$. Intuitively, larger $\beta$ means more randomness. In particular, at $\beta=0$ we start with loops…

Probability · Mathematics 2019-08-28 Peter Mühlbacher

A temporal graph is a graph whose edges appear at certain points in time. These graphs are temporally connected (in class TC) if all vertices can reach each other by temporal paths (traversing the edges in chronological order). Reachability…

Discrete Mathematics · Computer Science 2026-04-21 Arnaud Casteigts , Timothée Corsini , Nils Morawietz

In this paper, we introduce a type switching mechanism for the Contact Process on the lattice $\mathbb{Z}^d$. That is, we allow the individual particles/sites to switch between two (or more) types independently of one another, and the…

Probability · Mathematics 2024-07-02 Jochen Blath , Felix Hermann , Michel Reitmeier

The one-dimensional kinetic contact process with parallel update is introduced and studied by Monte Carlo simulations. This process is proposed to describe the plant population replication and epidemic disease spreading among them. The…

Statistical Mechanics · Physics 2008-04-22 P. N. Timonin , G. Y. Chitov

Finding interactions between variables in large and high-dimensional datasets is often a serious computational challenge. Most approaches build up interaction sets incrementally, adding variables in a greedy fashion. The drawback is that…

Machine Learning · Statistics 2016-04-27 Rajen Dinesh Shah , Nicolai Meinshausen

We study the simple random walk on trees and give estimates on the mixing and relaxation time. Relying on a recent characterization by Basu, Hermon and Peres, we give geometric criteria, which are easy to verify and allow to determine…

Probability · Mathematics 2021-04-13 Nina Gantert , Evita Nestoridi , Dominik Schmid

Let ${\mathbf T}_n$ be a uniformly random tree with vertex set $[n]=\{1,\ldots,n\}$, let $\Delta_{{\mathbf T}_n}$ be the largest vertex degree in ${\mathbf T}_n$, and let $\lambda_1({\mathbf T}_n),\ldots,\lambda_n({\mathbf T}_n)$ be the…

Probability · Mathematics 2024-04-03 Louigi Addario-Berry , Gábor Lugosi , Roberto Imbuzeiro Oliveira

We study locally interacting processes in discrete time, often called probabilistic cellular automata, indexed by locally finite graphs. For infinite regular trees and certain generalized Galton-Watson trees, we show that the marginal…

Probability · Mathematics 2025-10-28 Daniel Lacker , Kavita Ramanan , Ruoyu Wu

The contact process is a simple model for the spread of an infection in a structured population. We consider a variant of this process on Bienaym\'e-Galton-Watson trees, where vertices are equipped with a random fitness representing…

Probability · Mathematics 2024-10-17 Natalia Cardona-Tobón , Marcel Ortgiese

We study the asymptotic number of certain monotonically labeled increasing trees arising from a generalized evolution process. The main difference between the presented model and the classical model of binary increasing trees is that the…

Combinatorics · Mathematics 2019-10-30 Olivier Bodini , Antoine Genitrini , Bernhard Gittenberger , Stephan Wagner

Decision trees are widely used for non-linear modeling, as they capture interactions between predictors while producing inherently interpretable models. Despite their popularity, performing inference on the non-linear fit remains largely…

Methodology · Statistics 2026-04-14 Soham Bakshi , Snigdha Panigrahi

Biggins [Uniform convergence of martingales in the branching random walk. {\em Ann. Probab.}, 20(1):137--151, 1992] proved local uniform convergence of additive martingales in $d$-dimensional supercritical branching random walks at complex…

Probability · Mathematics 2016-11-17 Konrad Kolesko , Matthias Meiners

Let X_0=0, X_1, X_2, ..., be an aperiodic random walk generated by a sequence xi_1, xi_2, ..., of i.i.d. integer-valued random variables with common distribution p(.) having zero mean and finite variance. For an N-step trajectory…

Probability · Mathematics 2011-08-25 Ostap Hryniv , Yvan Velenik

An evolutionary tree is a rooted tree where each internal vertex has at least two children and where the leaves are labeled with distinct symbols representing species. Evolutionary trees are useful for modeling the evolutionary history of…

Computational Engineering, Finance, and Science · Computer Science 2007-05-23 Ming-Yang Kao

We consider a random walk on a multidimensional integer lattice with random bounds on local times, conditioned on the event that it hits a high level before its death. We introduce an auxiliary "core" process that has a regenerative…

Probability · Mathematics 2021-05-19 Sergey Foss , Alexander Sakhanenko

We study percolation on the hierarchical lattice of order $N$ where the probability of connection between two points separated by distance $k$ is of the form $c_k/N^{k(1+\delta)},\; \delta >-1$. Since the distance is an ultrametric, there…

Probability · Mathematics 2012-05-25 Donald Dawson , Luis Gorostiza

Directed covers of finite graphs are also known as periodic trees or trees with finitely many cone types. We expand the existing theory of directed covers of finite graphs to those of infinite graphs. While the lower growth rate still…

Probability · Mathematics 2009-10-05 Lorenz A. Gilch , Sebastian Müller

The phase diagram for a two-dimensional self-avoiding walk model on the square lattice incorporating attractive short-ranged interactions between parallel sections of walk is derived using numerical transfer matrix techniques. The model…

Statistical Mechanics · Physics 2009-11-07 D. P. Foster , F. Seno

Given a weighted graph, we introduce a partition of its vertex set such that the distance between any two clusters is bounded from below by a power of the minimum weight of both clusters. This partition is obtained by recursively merging…

Probability · Mathematics 2020-03-16 Laurent Ménard , Arvind Singh