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Reproducibility is essential to reliable scientific discovery in high-throughput experiments. In this work we propose a unified approach to measure the reproducibility of findings identified from replicate experiments and identify putative…

Applications · Statistics 2011-10-24 Qunhua Li , James B. Brown , Haiyan Huang , Peter J. Bickel

Whole Tale http://wholetale.org is a web-based, open-source platform for reproducible research supporting the creation, sharing, execution, and verification of "Tales" for the scientific research community. Tales are executable research…

Being able to duplicate published research results is an important process of conducting research whether to build upon these findings or to compare with them. This process is called "replicability" when using the original authors'…

Digital Libraries · Computer Science 2020-05-07 Nicolas Bonneel , David Coeurjolly , Julie Digne , Nicolas Mellado

Point clouds are a 3D space representation of an environment that was recorded with a high precision laser scanner. These scanners can suffer from environmental interference such as surface shading, texturing, and reflections. Because of…

Computer Vision and Pattern Recognition · Computer Science 2023-10-20 Esteban Segarra Martinez , Ryan P. McMahan

Recently, reproducibility has become a cornerstone in the security and privacy research community, including artifact evaluations and even a new symposium topic. However, Web measurements lack tools that can be reused across many…

Cryptography and Security · Computer Science 2025-06-05 Florian Hantke , Peter Snyder , Hamed Haddadi , Ben Stock

A deep learning system typically suffers from a lack of reproducibility that is partially rooted in hardware or software implementation details. The irreproducibility leads to skepticism in deep learning technologies and it can hinder them…

Computer Vision and Pattern Recognition · Computer Science 2024-10-15 Jiahao Pang , Muhammad Asad Lodhi , Junghyun Ahn , Yuning Huang , Dong Tian

Computational reproducibility refers to obtaining consistent results when rerunning an experiment. Jupyter Notebook, a web-based computational notebook application, facilitates running, publishing, and sharing computational experiments…

Software Engineering · Computer Science 2025-09-30 A S M Shahadat Hossain , Colin Brown , David Koop , Tanu Malik

The increasing importance of Computational Science and Engineering has highlighted the need for high-quality scientific software. However, research software development is often hindered by limited funding, time, staffing, and technical…

Software Engineering · Computer Science 2025-03-10 Armin Ariamajd , Raquel López-Ríos de Castro , Andrea Volkamer

This article aims to provide the information retrieval community with some reflections on recent advances in retrieval learning by analyzing the reproducibility of image-text retrieval models. Due to the increase of multimodal data over the…

Information Retrieval · Computer Science 2022-08-30 Jun Rao , Fei Wang , Liang Ding , Shuhan Qi , Yibing Zhan , Weifeng Liu , Dacheng Tao

Reproducibility of modeling is a problem that exists for any machine learning practitioner, whether in industry or academia. The consequences of an irreproducible model can include significant financial costs, lost time, and even loss of…

Machine Learning · Computer Science 2018-10-11 Peter Sugimura , Florian Hartl

Code agents are currently having skillful performance on repository-level software engineering benchmarks, but it remains unclear whether success on end-to-end tasks such as issue resolution truly reflects repository context reasoning, the…

Software Engineering · Computer Science 2026-05-27 Hanyu Li , Yichi Zhang , Speed Zhu , Hang Su , Jun Zhu , Yinpeng Dong

Rapid advances in computing technology over the past few decades have spurred two extraordinary phenomena in science: large-scale and high-throughput data collection coupled with the creation and implementation of complex statistical…

Other Statistics · Statistics 2020-07-27 Roger D. Peng , Stephanie C. Hicks

We present an algorithm and package, Redistributor, which forces a collection of scalar samples to follow a desired distribution. When given independent and identically distributed samples of some random variable $S$ and the continuous…

Computer Vision and Pattern Recognition · Computer Science 2024-07-09 Pavol Harar , Dennis Elbrächter , Monika Dörfler , Kory D. Johnson

This paper proposes a procedure to execute external source codes from a LaTeX document and include the calculation outputs in the resulting Portable Document Format (pdf) file automatically. It integrates programming tools into the LaTeX…

Software Engineering · Computer Science 2021-06-29 Haim Bar , HaiYing Wang

A recent expert consensus found that non-standard reporting in MRS studies led to poor reproducibility. In order to address this, MRSinMRS guidelines were introduced; however, because of the disparate nomenclature and data formats, adoption…

Container technologies such as Docker have become a crucial component of many software industry practices especially those pertaining to reproducibility and portability. The containerization philosophy has influenced the scientific…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-08-05 Peter Z. Vaillancourt , J. Eric Coulter , Richard Knepper , Brandon Barker

The reproducibility of scientific research has become a point of critical concern. We argue that openness and transparency are critical for reproducibility, and we outline an ecosystem for open and transparent science that has emerged…

Computers and Society · Computer Science 2018-09-27 Russell A. Poldrack , Krzysztof J. Gorgolewski , Gael Varoquaux

The reproducibility of scientific articles is central to the advancement of science. Despite this importance, evaluating reproducibility remains challenging due to the scarcity of ground truth data. Predictive models can address this…

Digital Libraries · Computer Science 2024-10-25 Akhil Pandey Akella , Sagnik Ray Choudhury , David Koop , Hamed Alhoori

In the era of data-driven science, conducting computational experiments that involve analysing large datasets using heterogeneous computational clusters, is part of the everyday routine for many scientists. Moreover, to ensure the…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-03-23 Thanasis Vergoulis , Konstantinos Zagganas , Loukas Kavouras , Martin Reczko , Stelios Sartzetakis , Theodore Dalamagas

Social recommendation has emerged as a powerful approach to enhance personalized recommendations by leveraging the social connections among users, such as following and friend relations observed in online social platforms. The fundamental…

Information Retrieval · Computer Science 2024-06-05 Zongwei Li , Lianghao Xia , Chao Huang
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