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Medically uncontrolled epileptic seizures affect nearly 15 million people worldwide, resulting in enormous economic and psychological burdens. Treatment of medically refractory epilepsy is essential for patients to achieve remission,…

Quantitative Methods · Quantitative Biology 2025-12-25 Yaoyue Wang , Arian Ashourvan , Guilherme Ramos , Paul Bogdan , Emily Pereira

The segmentation of lesions in Moderate to Severe Traumatic Brain Injury (msTBI) presents a significant challenge in neuroimaging due to the diverse characteristics of these lesions, which vary in size, shape, and distribution across brain…

Computer Vision and Pattern Recognition · Computer Science 2025-04-10 Constantin Ulrich , Tassilo Wald , Fabian Isensee , Klaus H. Maier-Hein

People with Multiple Sclerosis (MS) complain of problems with hand dexterity and cognitive fatigue. However, in many cases, impairments are subtle and difficult to detect. Functional near-infrared spectroscopy (fNIRS) is a non-invasive…

Machine Learning · Computer Science 2025-09-29 Sadman Saumik Islam , Bruna Dalcin Baldasso , Davide Cattaneo , Xianta Jiang , Michelle Ploughman

Introduction: Tuberculous meningitis (TBM) is a serious brain infection caused by Mycobacterium tuberculosis, characterized by inflammation of the meninges covering the brain and spinal cord. Diagnosis often requires invasive lumbar…

Computer Vision and Pattern Recognition · Computer Science 2025-04-02 Snigdha Agarwal , Ganaraja V H , Neelam Sinha , Abhilasha Indoria , Netravathi M , Jitender Saini

A major shortcoming of medical practice is the lack of an objective measure of conscious level. Impairment of consciousness is common, e.g. following brain injury and seizures, which can also interfere with sensory processing and volitional…

Neurons and Cognition · Quantitative Biology 2025-12-24 Alexis Pomares Pastor , Ines Ribeiro Violante , Gregory Scott

High temporal resolution measurements of human brain activity can be performed by recording the electric potentials on the scalp surface (electroencephalography, EEG), or by recording the magnetic fields near the surface of the head…

Data Analysis, Statistics and Probability · Physics 2015-01-22 Kevin H. Knuth

Hemispheric strokes impair motor control in contralateral body parts, necessitating effective rehabilitation strategies. Motor Imagery-based Brain-Computer Interfaces (MI-BCIs) promote neuroplasticity, aiding the recovery of motor…

Signal Processing · Electrical Eng. & Systems 2025-01-06 Praveen K. Parashiva , Sagila Gangadaran , A. P. Vinod

Although functional magnetic resonance imaging (fMRI) is widely used for the study of brain functions, the blood oxygenation level dependent (BOLD) effect is incompletely understood. Particularly, negative BOLD responses(NBRs) is…

Neurons and Cognition · Quantitative Biology 2017-12-12 Hiroshi Tsukimoto , Takefumi Matsubara

Until recently, human behavioral data from reading has mainly been of interest to researchers to understand human cognition. However, these human language processing signals can also be beneficial in machine learning-based natural language…

Computation and Language · Computer Science 2021-08-11 Nora Hollenstein , Cedric Renggli , Benjamin Glaus , Maria Barrett , Marius Troendle , Nicolas Langer , Ce Zhang

Blood oxygenation level-dependent (BOLD) functional magnetic resonance imaging (fMRI) is widely used to visualize brain activation regions by detecting hemodynamic responses associated with increased metabolic demand. While alternative MRI…

Quantitative Methods · Quantitative Biology 2024-09-13 Kyu-Jin Jung , Chuanjiang Cui , Soo-Hyung Lee , Chan-Hee Park , Ji-Won Chun , Dong-Hyun Kim

Brain source imaging is an important method for noninvasively characterizing brain activity using Electroencephalogram (EEG) or Magnetoencephalography (MEG) recordings. Traditional EEG/MEG Source Imaging (ESI) methods usually assume that…

Applications · Statistics 2019-06-07 Feng Liu , Li Wang , Yifei Lou , Rencang Li , Patrick Purdon

Neuroradiologists and neurosurgeons increasingly opt to use functional magnetic resonance imaging (fMRI) to map functionally relevant brain regions for noninvasive presurgical planning and intraoperative neuronavigation. This application…

Methodology · Statistics 2023-06-07 Andrew S. Whiteman , Andreas J. Bartsch , Jian Kang , Timothy D. Johnson

The formation of transient networks in response to external stimuli or as a reflection of internal cognitive processes is a hallmark of human brain function. However, its identification in fMRI data of the human brain is notoriously…

Neurons and Cognition · Quantitative Biology 2016-12-05 Gabriele Lohmann , Johannes Stelzer , Verena Zuber , Tilo Buschmann , Daniel Margulies , Andreas Bartels , Klaus Scheffler

Intracranial EEG (iEEG) is the gold standard technique for epileptogenic zone (EZ) localisation, but requires a hypothesis of which tissue is epileptogenic, guided by qualitative analysis of seizure semiology and other imaging modalities…

With the advances in high resolution neuroimaging, there has been a growing interest in the detection of functional brain connectivity. Complex network theory has been proposed as an attractive mathematical representation of functional…

Neural and Evolutionary Computing · Computer Science 2018-09-18 Arash Golibagh Mahyari , Selin Aviyente

In several diagnosis and therapy procedures based on electrostimulation effect, the internal physical quantity related to the stimulation is the induced electric field. To estimate the induced electric field in an individual human model,…

Medical Physics · Physics 2021-02-03 Essam A. Rashed , Jose Gomez-Tames , Akimasa Hirata

The vast majority of fMRI studies of task-related brain activity utilize common levels of task demands and analyses that rely on the central tendencies of the data. This approach does not take into account perceived difficulty nor regional…

Neurons and Cognition · Quantitative Biology 2021-10-14 Jason Steffener , Chris Habeck , Dylan Franklin , Meghan Lau , Yara Yakoub , Maryse Gad

Electroencephalography (EEG) denoising methods typically depend on manual intervention or clean reference signals. This work introduces a task-oriented learning framework for automatic EEG denoising that uses only task labels without clean…

Signal Processing · Electrical Eng. & Systems 2026-03-12 Tian-Yu Xiang , Zheng Lei , Xiao-Hu Zhou , Xiao-Liang Xie , Shi-Qi Liu , Mei-Jiang Gui , Hong-Yun Ou , Xin-Zheng Huang , Xin-Yi Fu , Zeng-Guang Hou

Functional connectivity (FC) refers to the investigation of interactions between brain regions to understand integration of neural activity in several regions. FC is often estimated using functional magnetic resonance images (fMRI). There…

Applications · Statistics 2023-01-24 Nathan Tung , Jerome Sanes , Eli Upfal , Ani Eloyan

The brain's functional connectivity fluctuates over time instead of remaining steady in a stationary mode even during the resting state. This fluctuation establishes the dynamical functional connectivity that transitions in a non-random…

Neurons and Cognition · Quantitative Biology 2022-03-28 Shikuang Deng , Jingwei Li , B. T. Thomas Yeo , Shi Gu