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This paper presents a new approach for trees-based regression, such as simple regression tree, random forest and gradient boosting, in settings involving correlated data. We show the problems that arise when implementing standard…

Methodology · Statistics 2021-08-09 Assaf Rabinowicz , Saharon Rosset

The problem of reconstructing evolutionary trees or phylogenies is of great interest in computational biology. A popular model for this problem assumes that we are given the set of leaves (current species) of an unknown binary tree and the…

Data Structures and Algorithms · Computer Science 2022-06-16 Eshwar Ram Arunachaleswaran , Anindya De , Sampath Kannan

We demonstrate that adaptively controlling the size of individual regression trees in a random forest can improve predictive performance, contrary to the conventional wisdom that trees should be fully grown. A fast pruning algorithm,…

Machine Learning · Statistics 2024-08-15 Nikola Surjanovic , Andrew Henrey , Thomas M. Loughin

Sum-Product Networks with complex probability distribution at the leaves have been shown to be powerful tractable-inference probabilistic models. However, while learning the internal parameters has been amply studied, learning complex leaf…

Machine Learning · Computer Science 2017-06-15 Mattia Desana , Christoph Schnörr

We introduce a $k$-leaf removal algorithm as a generalization of the so-called leaf removal algorithm. In this pruning algorithm, vertices of degree smaller than $k$, together with their first nearest neighbors and all incident edges are…

Disordered Systems and Neural Networks · Physics 2019-02-26 N. Azimi-Tafreshi , S. Osat , S. N. Dorogovtsev

We present a method for reducing the treewidth of a graph while preserving all the minimal $s-t$ separators. This technique turns out to be very useful for establishing the fixed-parameter tractability of constrained separation and…

Data Structures and Algorithms · Computer Science 2010-02-03 Dániel Marx , Barry O'Sullivan , Igor Razgon

Random forests are a very effective and commonly used statistical method, but their full theoretical analysis is still an open problem. As a first step, simplified models such as purely random forests have been introduced, in order to shed…

Statistics Theory · Mathematics 2014-07-16 Sylvain Arlot , Robin Genuer

This paper considers the enumeration of ternary trees (i.e. rooted ordered trees in which each vertex has 0 or 3 children) avoiding a contiguous ternary tree pattern. We begin by finding recurrence relations for several simple tree…

Combinatorics · Mathematics 2011-12-30 Nathan Gabriel , Katherine Peske , Lara Pudwell , Samuel Tay

We deal with a random graph model where at each step, a vertex is chosen uniformly at random, and it is either duplicated or its edges are deleted. Duplication has a given probability. We analyse the limit distribution of the degree of a…

Probability · Mathematics 2014-09-19 Ágnes Backhausz , Tamás F. Móri

The feedback vertex set problem is one of the most studied parameterized problems. Several generalizations of the problem have been studied where one is to delete vertices to obtain graphs close to acyclic. In this paper, we give an FPT…

Data Structures and Algorithms · Computer Science 2020-11-26 Bin Sheng

The reconstruction of a central tendency `species tree' from a large number of conflicting gene trees is a central problem in systematic biology. Moreover, it becomes particularly problematic when taxon coverage is patchy, so that not all…

Populations and Evolution · Quantitative Biology 2014-05-27 Mike Steel , Joel D. Velasco

We consider the problem of enumerating d-irreducible maps, i.e. planar maps whose all cycles have length at least d, and such that any cycle of length d is the boundary of a face of degree d. We develop two approaches in parallel: the…

Combinatorics · Mathematics 2019-02-20 J. Bouttier , E. Guitter

We provide time- and sample-efficient algorithms for learning and testing latent-tree Ising models, i.e. Ising models that may only be observed at their leaf nodes. On the learning side, we obtain efficient algorithms for learning a…

Machine Learning · Computer Science 2023-07-11 Davin Choo , Yuval Dagan , Constantinos Daskalakis , Anthimos Vardis Kandiros

Tree ensembles, such as random forests and boosted trees, are renowned for their high prediction performance. However, their interpretability is critically limited due to the enormous complexity. In this study, we present a method to make a…

Machine Learning · Statistics 2017-03-01 Satoshi Hara , Kohei Hayashi

A method for creating a forest of model trees to fit samples of a function defined on images is described in several steps: down-sampling the images, determining a tree's hyperplanes, applying convolutions to the hyperplanes to handle small…

Machine Learning · Computer Science 2026-01-28 William Ward Armstrong , Hongyi Li , Jun Xu

We study the crossing-minimization problem in a layered graph drawing of planar-embedded rooted trees whose leaves have a given total order on the first layer, which adheres to the embedding of each individual tree. The task is then to…

Discrete Mathematics · Computer Science 2024-02-29 Julia Katheder , Stephen G. Kobourov , Axel Kuckuk , Maximilian Pfister , Johannes Zink

The isolation forest algorithm for outlier detection exploits a simple yet effective observation: if taking some multivariate data and making uniformly random cuts across the feature space recursively, it will take fewer such random cuts…

Machine Learning · Statistics 2021-11-24 David Cortes

Objectives. We generate via advanced Deep Learning (DL) techniques artificial leaf images in an automatized way. We aim to dispose of a source of training samples for AI applications for modern crop management. Such applications require…

Computer Vision and Pattern Recognition · Computer Science 2023-01-11 Alessandro Benfenati , Davide Bolzi , Paola Causin , Roberto Oberti

The standard algorithm to eliminate indirect left recursion takes a preventative approach, rewriting a grammar's rules so that indirect left recursion is no longer possible, rather than eliminating it only as and when it occurs. This…

Data Structures and Algorithms · Computer Science 2024-11-12 James Smith

We study a random graph model in continuous time. Each vertex is partially copied with the same rate, i.e.\ an existing vertex is copied and every edge leading to the copied vertex is copied with independent probability $p$. In addition,…

Probability · Mathematics 2024-07-02 Felix Hermann , Peter Pfaffelhuber
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