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We introduce propagation kernels, a general graph-kernel framework for efficiently measuring the similarity of structured data. Propagation kernels are based on monitoring how information spreads through a set of given graphs. They leverage…

Machine Learning · Statistics 2014-10-14 Marion Neumann , Roman Garnett , Christian Bauckhage , Kristian Kersting

The signature kernel is a positive definite kernel for sequential data. It inherits theoretical guarantees from stochastic analysis, has efficient algorithms for computation, and shows strong empirical performance. In this short survey…

Probability · Mathematics 2023-05-09 Darrick Lee , Harald Oberhauser

Biological and cellular systems are often modeled as graphs in which vertices represent objects of interest (genes, proteins, drugs) and edges represent relational ties among these objects (binds-to, interacts-with, regulates). This…

Machine Learning · Statistics 2017-03-16 Jose Lugo-Martinez , Predrag Radivojac

Provenance is a record that describes how entities, activities, and agents have influenced a piece of data; it is commonly represented as graphs with relevant labels on both their nodes and edges. With the growing adoption of provenance in…

Machine Learning · Computer Science 2021-09-16 David Kohan Marzagão , Trung Dong Huynh , Ayah Helal , Sean Baccas , Luc Moreau

This paper analyses the construction of the kernel graph of a non-synchronizing transformation semigroup and introduces the inverse synchronization problem. Given a transformation semigroup $S\leq T_n$, we construct the kernel graph…

Combinatorics · Mathematics 2016-03-14 Artur Schaefer

The presented work focuses on problems from determinant theory, set theory and topology. The term graph is the binding element that connects these problems. Graphs are distinguished by their geometrical simplicity, which helps in showing…

History and Overview · Mathematics 2024-12-24 Ágnes Cseh

In this paper we introduce the concept of completeness of sets. We study this property on the set of integers. We examine how this property is preserved as we carry out various operations compatible with sets. We also introduce the problem…

General Mathematics · Mathematics 2021-08-24 Theophilus Agama

Knowledge graphs (KGs) such as DBpedia, Freebase, YAGO, Wikidata, and NELL were constructed to store large-scale, real-world facts as (subject, predicate, object) triples -- that can also be modeled as a graph, where a node (a subject or an…

Databases · Computer Science 2023-05-25 Arijit Khan

Necessary and sufficient conditions for a sequence of positive integers to be the degree sequence of a 3-connected simple graph are detailed. Conditions are also given under which such a sequence is necessarily 3-connected i.e. the sequence…

Combinatorics · Mathematics 2015-12-18 Jonathan McLaughlin

Knowledge Graph Completion is a task of expanding the knowledge graph/base through estimating possible entities, or proper nouns, that can be connected using a set of predefined relations, or verb/predicates describing interconnections of…

Computation and Language · Computer Science 2021-01-25 Tong Chen , Sirou Zhu , Yiming Wen , Zhaomin Zheng

A total dominating set of a graph $G=(V,E)$ is a subset $D \subseteq V$ such that every vertex in $V$ is adjacent to some vertex in $D$. Finding a total dominating set of minimum size is NP-hard on planar graphs and W[2]-complete on general…

Data Structures and Algorithms · Computer Science 2023-06-22 Valentin Garnero , Ignasi Sau

In this article, we have defined nil clean graph of a ring $R$. The vertex set is the ring $R$, two ring elements $a$ and $b$ are adjacent if and only if $a + b$ is nil clean in $R$. Graph theoretic properties like girth, dominating set,…

Rings and Algebras · Mathematics 2018-02-21 Dhiren Kumar Basnet , Jayanta Bhattacharyya

A $k$-connected set in an infinite graph, where $k > 0$ is an integer, is a set of vertices such that any two of its subsets of the same size $\ell \leq k$ can be connected by $\ell$ disjoint paths in the whole graph. We characterise the…

Combinatorics · Mathematics 2020-09-21 J. Pascal Gollin , Karl Heuer

We show that the following problems are NP-complete. 1. Can the vertex set of a graph be partitioned into two sets such that each set induces a perfect graph? 2. Is the difference between the chromatic number and clique number at most $1$…

Combinatorics · Mathematics 2017-05-18 Vaidy Sivaraman

We consider the problem of classifying graphs using graph kernels. We define a new graph kernel, called the generalized shortest path kernel, based on the number and length of shortest paths between nodes. For our example classification…

Data Structures and Algorithms · Computer Science 2015-11-20 Linus Hermansson , Fredrik D. Johansson , Osamu Watanabe

This work derives closed-form expressions computing the expectation of co-presence and of number of co-occurrences of nodes on paths sampled from a network according to general path weights (a bag of paths). The underlying idea is that two…

Machine Learning · Computer Science 2021-08-24 Guillaume Guex , Sylvain Courtain , Marco Saerens

In homotopy theory, exact sequences and spectral sequences consist of groups and pointed sets, linked by actions. We prove that the theory of such exact and spectral sequences can be established in a categorical setting which is based on…

Algebraic Topology · Mathematics 2010-07-06 Marco Grandis

Many algorithms for ranked data become computationally intractable as the number of objects grows due to the complex geometric structure induced by rankings. An additional challenge is posed by partial rankings, i.e. rankings in which the…

Machine Learning · Computer Science 2022-07-19 Michelangelo Conserva , Marc Peter Deisenroth , K S Sesh Kumar

Let $G$ be a group. The power graph of $G$ is a graph with vertex set $G$ in which two distinct elements $x,y$ are adjacent if one of them is a power of the other. We characterize all groups whose power graphs have finite independence…

Combinatorics · Mathematics 2019-10-16 P. J. Cameron , S. H. Jafari

We introduce the first graph kernels for metric graphs via tropical algebraic geometry. In contrast to conventional graph kernels based on graph combinatorics such as nodes, edges, and subgraphs, our metric graph kernels are purely based on…

Machine Learning · Computer Science 2026-01-30 Yueqi Cao , Anthea Monod