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The transport of deformable objects including polymer particles, vesicles and cells, has been a subject of interest for several decades where the majority of experimental and theoretical studies have been focused on circular tubes. Due to…

Soft Condensed Matter · Physics 2017-11-28 Shamim M. Ahmmed , Naureen S. Suteria , Valeria Garbin , Siva A. Vanapalli

We investigate the interaction of electromagnetic waves and electron beams in a 4 meters long traveling wave tube (TWT). The device is specially designed to simulate beam-plasma experiments without appreciable noise. This TWT presents an…

Plasma Physics · Physics 2020-10-19 M. C. de Sousa , F. Doveil , Y. Elskens , I. L. Caldas

Recent numerical analyses to optimize the design of microfluidic devices for more effective entrapment or segregation of surrogate circulating tumor cells (CTCs) from healthy cells have been reported in the literature without concurrently…

Computational Physics · Physics 2020-06-23 Hakan Başağaoğlu , Justin Blount , Sauro Succi , Christopher J. Freitas

We present a phenomenological model for the mixing length used in turbulence models. It has the advantage of naturally accounting for the object's geometry while satisfying the standard symmetries of the Navier-Stokes equations. We employ…

We use numerial simulations to study the absorption and phase shift of surface-gravity waves caused by groups of magnetic flux tubes. The dependence of the scattering coefficients with the distance between the tubes and their positions is…

Solar and Stellar Astrophysics · Physics 2015-06-16 T. Felipe , A. D. Crouch , A. C. Birch

In this work we present a new conceptual model to describe fluid flow in a porous media system in presence of a large fault. Geological faults are often modeled simply as interfaces in the rock matrix, but they are complex structure where…

Numerical Analysis · Mathematics 2019-03-05 Alessio Fumagalli , Anna Scotti

Active transport such as fluid flow is sought in molecular communication to extend coverage, improve reliability, and mitigate interference. Flow models are often over-simplified, assuming one-dimensional diffusion with constant drift.…

Emerging Technologies · Computer Science 2024-10-30 Wayan Wicke , Tobias Schwering , Arman Ahmadzadeh , Vahid Jamali , Adam Noel , Robert Schober

We propose a theoretical approach to estimate the permeability coefficient of substrates (permeants) for crossing membranes from donor (D) phase to acceptor (A) phase by means of molecular dynamics (MD) simulation. A fundamental aspect of…

Solvent-free coarse grained models represent one of the most promising approaches for molecular simulations of mesoscopically large membranes. In these models, the size of the simulated membrane is limited by the slow relaxation time of…

Soft Condensed Matter · Physics 2009-11-13 Oded Farago

The rheology of molecular brushes remains challenging to control due to the multiple length scales and relaxation processes involved and the lack of direct observation of molecular conformation during flow. We use molecular dynamics…

Soft Condensed Matter · Physics 2023-08-08 Utku Gürel , Andrea Giuntoli

A computational fluid dynamics (CFD) simulation framework for fluid-flow prediction is developed on the Tensor Processing Unit (TPU) platform. The TPU architecture is featured with accelerated dense matrix multiplication, large high…

Computational Physics · Physics 2022-03-02 Qing Wang , Matthias Ihme , Yi-Fan Chen , John Anderson

One of the most promising applications in nanoscience is the design of new materials to improve water permeability and selectivity of nanoporous membranes. Understanding the molecular architecture behind these fascinating structures and how…

Soft Condensed Matter · Physics 2021-09-10 João P. K. Abal , Rodrigo F. Dillenburg , Mateus H. Köhler , Marcia C. Barbosa

The results of a combined experimental and numerical study of the flow in slowly diverging pipes are presented. Interestingly, an axisymmetric conical recirculation cell has been observed. The conditions for its existence and the length of…

Fluid Dynamics · Physics 2025-05-13 Jorge Peixinho , Hugues Besnard

Optimization of fluid transport in the slime mold Physarum polycephalum has been the subject of several modeling efforts in recent literature. Existing models assume that the tube adaptation mechanism in P. polycephalum's tubular network is…

Tissues and Organs · Quantitative Biology 2019-07-01 Vincenzo Bonifaci

The cloaking performance of two microwave cloaks, both based on the recently proposed transmission-line approach, are studied using commercial full-wave simulation software. The cloaks are shown to be able to reduce the total scattering…

Optics · Physics 2009-04-21 Pekka Alitalo , Olli Luukkonen , Juan Mosig , Sergei Tretyakov

This work presents a feature-rich open-source library for wall-modelled large-eddy simulation (WMLES), which is a turbulence modelling approach that reduces the computational cost of traditional (wall-resolved) LES by introducing special…

Fluid Dynamics · Physics 2019-04-01 Timofey Mukha , Saleh Rezaeiravesh , Mattias Liefvendahl

Over 125 years ago, Henry Selby Hele-Shaw realized that the depth-averaged flow in thin gap geometries can be closely approximated by two-dimensional (2D) potential flow, in a surprising marriage between the theories of viscous-dominated…

Fluid Dynamics · Physics 2026-04-09 Lingyun Ding , Terry Wang , Marcus Roper

In this paper the application of the multi-level Monte Carlo (MLMC) method on numerical simulations of turbulent flows with uncertain parameters is investigated. Several strategies for setting up the MLMC method are presented, and the…

Computation · Statistics 2016-08-22 Qingsha Chen , Ju Ming

This paper proposes a novel imperfect spherical transmitter (TX) model, namely the membrane fusion (MF)-based TX, that adopts MF between a vesicle and the TX membrane to release molecules encapsulated within the vesicle. For the MF-based…

Emerging Technologies · Computer Science 2021-02-17 Xinyu Huang , Yuting Fang , Adam Noel , Nan Yang

We study the shape, elasticity and fluctuations of the recently predicted (cond-mat/9510172) and subsequently observed (in numerical simulations) (cond-mat/9705059) tubule phase of anisotropic membranes, as well as the phase transitions…

Soft Condensed Matter · Physics 2009-09-25 Leo Radzihovsky , John Toner