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Quality assessment of medical images is essential for complete automation of image processing pipelines. For large population studies such as the UK Biobank, artefacts such as those caused by heart motion are problematic and manual…

Computer Vision and Pattern Recognition · Computer Science 2018-09-03 Ilkay Oksuz , Bram Ruijsink , Esther Puyol-Anton , Aurelien Bustin , Gastao Cruz , Claudia Prieto , Daniel Rueckert , Julia A. Schnabel , Andrew P. King

We perform unsupervised analysis of image-derived shape and motion features extracted from 3822 cardiac 4D MRIs of the UK Biobank. First, with a feature extraction method previously published based on deep learning models, we extract from…

Computer Vision and Pattern Recognition · Computer Science 2019-02-18 Qiao Zheng , Hervé Delingette , Kenneth Fung , Steffen E. Petersen , Nicholas Ayache

The effectiveness of a cardiovascular magnetic resonance (CMR) scan depends on the ability of the operator to correctly tune the acquisition parameters to the subject being scanned and on the potential occurrence of imaging artefacts such…

Good quality of medical images is a prerequisite for the success of subsequent image analysis pipelines. Quality assessment of medical images is therefore an essential activity and for large population studies such as the UK Biobank (UKBB),…

Computer Vision and Pattern Recognition · Computer Science 2018-12-12 Ilkay Oksuz , Bram Ruijsink , Esther Puyol-Anton , James Clough , Gastao Cruz , Aurelien Bustin , Claudia Prieto , Rene Botnar , Daniel Rueckert , Julia A. Schnabel , Andrew P. King

The shape and motion of the heart provide essential clues to understanding the mechanisms of cardiovascular disease. With the advent of large-scale cardiac imaging data, statistical atlases become a powerful tool to provide automated and…

Cardiac diseases are among the leading causes of morbidity and mortality worldwide, which requires accurate and timely diagnostic strategies. In this study, we introduce an innovative approach that combines deep learning image registration…

Machine Learning · Computer Science 2025-07-09 Comte Valentin , Gemma Piella , Mario Ceresa , Miguel A. Gonzalez Ballester

The human heart is a sophisticated system composed of four cardiac chambers with distinct shapes, which function in a coordinated manner. Existing shape models of the heart mainly focus on the ventricular chambers and they are derived from…

Image and Video Processing · Electrical Eng. & Systems 2026-03-31 Qiang Ma , Qingjie Meng , Yicheng Wu , Shuo Wang , Mengyun Qiao , Steven Niederer , Declan P. O'Regan , Paul M. Matthews , Wenjia Bai

Purpose: The motion of the common carotid artery tissue layers along the vessel axis during the cardiac cycle, observed in ultrasound imaging, is associated with the presence of established cardiovascular risk factors. However, the vast…

Medical Physics · Physics 2020-07-27 Guillaume Zahnd , Kozue Saito , Kazuyuki Nagatsuka , Yoshito Otake , Yoshinobu Sato

Motion analysis is used in computer vision to understand the behaviour of moving objects in sequences of images. Optimising the interpretation of dynamic biological systems requires accurate and precise motion tracking as well as efficient…

Cardiac motion estimation is critical to the assessment of cardiac function. Myocardium feature tracking (FT) can directly estimate cardiac motion from cine MRI, which requires no special scanning procedure. However, current deep…

Image and Video Processing · Electrical Eng. & Systems 2020-08-19 Pingjun Chen , Xiao Chen , Eric Z. Chen , Hanchao Yu , Terrence Chen , Shanhui Sun

In a large-scale medical examination, the UK Biobank study has successfully imaged more than 32,000 volunteer participants with magnetic resonance imaging (MRI). Each scan is linked to extensive metadata, providing a comprehensive medical…

Image and Video Processing · Electrical Eng. & Systems 2020-10-12 Taro Langner , Robin Strand , Håkan Ahlström , Joel Kullberg

Motion scoring of cardiac myocardium is of paramount importance for early detection and diagnosis of various cardiac disease. It aims at identifying regional wall motions into one of the four types including normal, hypokinetic, akinetic,…

Computer Vision and Pattern Recognition · Computer Science 2018-06-15 Wufeng Xue , Gary Brahm , Stephanie Leung , Ogla Shmuilovich , Shuo Li

Segmenting anatomical structures in medical images has been successfully addressed with deep learning methods for a range of applications. However, this success is heavily dependent on the quality of the image that is being segmented. A…

Image and Video Processing · Electrical Eng. & Systems 2020-07-06 Ilkay Oksuz , James R. Clough , Bram Ruijsink , Esther Puyol Anton , Aurelien Bustin , Gastao Cruz , Claudia Prieto , Andrew P. King , Julia A. Schnabel

Large prospective epidemiological studies acquire cardiovascular magnetic resonance (CMR) images for pre-symptomatic populations and follow these over time. To support this approach, fully automatic large-scale 3D analysis is essential. In…

Image and Video Processing · Electrical Eng. & Systems 2019-07-04 Rahman Attar , Marco Pereanez , Christopher Bowles , Stefan K. Piechnik , Stefan Neubauer , Steffen E. Petersen , Alejandro F. Frangi

Machine learning models have the potential to identify cardiovascular diseases (CVDs) early and accurately in primary healthcare settings, which is crucial for delivering timely treatment and management. Although population-based CVD risk…

Population imaging studies rely upon good quality medical imagery before downstream image quantification. This study provides an automated approach to assess image quality from cardiovascular magnetic resonance (CMR) imaging at scale. We…

Image and Video Processing · Electrical Eng. & Systems 2025-10-28 Shahabedin Nabavi , Hossein Simchi , Mohsen Ebrahimi Moghaddam , Alejandro F. Frangi , Ahmad Ali Abin

3D motion estimation from cine cardiac magnetic resonance (CMR) images is important for the assessment of cardiac function and diagnosis of cardiovascular diseases. Most of the previous methods focus on estimating pixel-/voxel-wise motion…

Image and Video Processing · Electrical Eng. & Systems 2022-09-07 Qingjie Meng , Wenjia Bai , Tianrui Liu , Declan P O'Regan , Daniel Rueckert

Machine learning has been successfully used in critical domains, such as medicine. However, extracting meaningful insights from biomedical data is often constrained by the lack of their available disease labels. In this research, we…

Quantitative Methods · Quantitative Biology 2025-04-02 Hido Pinto , Eran Segal

Convolutional neural network (CNN) based segmentation methods provide an efficient and automated way for clinicians to assess the structure and function of the heart in cardiac MR images. While CNNs can generally perform the segmentation…

Accelerating the acquisition of magnetic resonance imaging (MRI) is a challenging problem, and many works have been proposed to reconstruct images from undersampled k-space data. However, if the main purpose is to extract certain…

Image and Video Processing · Electrical Eng. & Systems 2019-08-22 Chen Qin , Wenjia Bai , Jo Schlemper , Steffen E. Petersen , Stefan K. Piechnik , Stefan Neubauer , Daniel Rueckert
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