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We introduce MarkDiffusion, an open-source Python toolkit for generative watermarking of latent diffusion models. It comprises three key components: a unified implementation framework for streamlined watermarking algorithm integrations and…

Cryptography and Security · Computer Science 2025-10-17 Leyi Pan , Sheng Guan , Zheyu Fu , Luyang Si , Huan Wang , Zian Wang , Hanqian Li , Xuming Hu , Irwin King , Philip S. Yu , Aiwei Liu , Lijie Wen

This paper introduces Eilmer, a general-purpose open-source compressible flow solver developed at the University of Queensland, designed to support research calculations in hypersonics and high-speed aerothermodynamics. Eilmer has a broad…

Computational Engineering, Finance, and Science · Computer Science 2022-10-06 Nicholas N. Gibbons , Kyle A. Damm , Peter A. Jacobs , Rowan J. Gollan

We present a publicly accessible database designed to aid in the conception, training, demonstration, evaluation, and comparison of reduced-complexity models for fluid mechanics. Availability of high-quality flow data is essential for all…

Complex scientific codes and the datasets they generate are in need of a sophisticated categorization environment that allows the community to store, search, and enhance metadata in an open, dynamic system. Currently, data is often…

Digital Libraries · Computer Science 2012-03-20 Eric L. Seidel

PySEMTools is a Python-based library for post-processing simulation data produced with high-order hexahedral elements in the context of the spectral element method in computational fluid dynamics. It aims to minimize intermediate steps…

Computational Physics · Physics 2025-04-18 Adalberto Perez , Siavash Toosi , Tim Felle Olsen , Stefano Markidis , Philipp Schlatter

Dependency bloat is a persistent challenge in Python projects, which increases maintenance costs and security risks. While numerous tools exist for detecting unused dependencies in Python, removing these dependencies across the source code…

Used to store the results of $\mu$SR measurements at TRIUMF, the Muon Data (MUD) file format serves as a useful and flexible scheme that is both lightweight and self-describing. The application programming interface (API) for these files is…

Data Analysis, Statistics and Probability · Physics 2020-04-23 Derek Fujimoto

modAL is a modular active learning framework for Python, aimed to make active learning research and practice simpler. Its distinguishing features are (i) clear and modular object oriented design (ii) full compatibility with scikit-learn…

Machine Learning · Computer Science 2018-12-13 Tivadar Danka , Peter Horvath

Direct Numerical Simulations (DNS) of the Navier Stokes equations is an invaluable research tool in fluid dynamics. Still, there are few publicly available research codes and, due to the heavy number crunching implied, available codes are…

Mathematical Software · Computer Science 2016-05-04 Mikael Mortensen , Hans Petter Langtangen

FCMpy is an open source package in Python for building and analyzing Fuzzy Cognitive Maps. More specifically, the package allows 1) deriving fuzzy causal weights from qualitative data, 2) simulating the system behavior, 3) applying machine…

Mathematical Software · Computer Science 2022-11-03 Samvel Mkhitaryan , Philippe J. Giabbanelli , Maciej K. Wozniak , Gonzalo Napoles , Nanne K. de Vries , Rik Crutzen

A large amount of data is produced every second from modern information systems such as mobile devices, the world wide web, Internet of Things, social media, etc. Analysis and mining of this massive data requires a lot of advanced tools and…

Machine Learning · Computer Science 2020-01-13 Rising Odegua , Festus Ikpotokin

In this work, we present scikit-fingerprints, a Python package for computation of molecular fingerprints for applications in chemoinformatics. Our library offers an industry-standard scikit-learn interface, allowing intuitive usage and easy…

Software Engineering · Computer Science 2025-08-12 Jakub Adamczyk , Piotr Ludynia

This paper describes HyperStream, a large-scale, flexible and robust software package, written in the Python language, for processing streaming data with workflow creation capabilities. HyperStream overcomes the limitations of other…

Machine Learning · Computer Science 2019-08-09 Tom Diethe , Meelis Kull , Niall Twomey , Kacper Sokol , Hao Song , Miquel Perello-Nieto , Emma Tonkin , Peter Flach

The immersed boundary method (IB) is an elegant way to fully couple the motion of a fluid and deformations of an immersed elastic structure. In that vein, the IB2d software allows for expedited explorations of fluid-structure interaction…

Fluid Dynamics · Physics 2018-09-19 Nicholas Battista , Christopher Strickland , Aaron Barrett , Laura Miller

$\textbf{scqubits}$ is an open-source Python package for simulating and analyzing superconducting circuits. It provides convenient routines to obtain energy spectra of common superconducting qubits, such as the transmon, fluxonium, flux,…

Quantum Physics · Physics 2021-11-24 Peter Groszkowski , Jens Koch

Deep learning (DL) systems can make our life much easier, and thus are gaining more and more attention from both academia and industry. Meanwhile, bugs in DL systems can be disastrous, and can even threaten human lives in safety-critical…

Software Engineering · Computer Science 2022-03-01 Anjiang Wei , Yinlin Deng , Chenyuan Yang , Lingming Zhang

The package \textsf{clayton} is designed to be intuitive, user-friendly, and efficient. It offers a wide range of copula models, including Archimedean, Elliptical, and Extreme. The package is implemented in pure \textsf{Python}, making it…

Computation · Statistics 2023-06-06 Alexis Boulin

Flaky tests obstruct software development, and studying and proposing mitigations against them has therefore become an important focus of software engineering research. To conduct sound investigations on test flakiness, it is crucial to…

Software Engineering · Computer Science 2023-05-09 Martin Gruber , Gordon Fraser

relentless is an open-source Python package that enables the optimization of objective functions computed using molecular dynamics simulations. It has a high-level, extensible interface for model parametrization; setting up, running, and…

Soft Condensed Matter · Physics 2024-08-07 Adithya N Sreenivasan , C. Levi Petix , Zachary M. Sherman , Michael P. Howard

Literate programming - the bringing together of program code and natural language narratives - has become a ubiquitous approach in the realm of data science. This methodology is appealing as well for the domain of Density Functional Theory…

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