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Problems with localized nonhomogeneous material properties present well-known challenges for numerical simulations. In particular, such problems may feature large differences in length scales, causing difficulties with meshing and…

Numerical Analysis · Mathematics 2021-11-23 Alex Viguerie , Silvia Bertoluzza , Alessandro Veneziani , Ferdinando Auricchio

Density matrix embedding theory (DMET) is a fully quantum-mechanical embedding method which shows great promise as a method of defeating the inherent exponential cost scaling of multiconfigurational wave function-based calculations by…

Chemical Physics · Physics 2019-02-07 Matthew R. Hermes , Laura Gagliardi

Fragment-Based Drug Discovery (FBDD) is a popular approach in early drug development, but designing effective linkers to combine disconnected molecular fragments into chemically and pharmacologically viable candidates remains challenging.…

Machine Learning · Computer Science 2025-09-24 Xuefeng Liu , Songhao Jiang , Qinan Huang , Tinson Xu , Ian Foster , Mengdi Wang , Hening Lin , Rick Stevens

We propose a fast, distance-preserving, binary embedding algorithm to transform a high-dimensional dataset $\mathcal{T}\subseteq\mathbb{R}^n$ into binary sequences in the cube $\{\pm 1\}^m$. When $\mathcal{T}$ consists of well-spread (i.e.,…

Information Theory · Computer Science 2021-03-11 Jinjie Zhang , Rayan Saab

Entanglement forging based variational algorithms leverage the bi-partition of quantum systems for addressing ground state problems. The primary limitation of these approaches lies in the exponential summation required over the numerous…

We propose a new, harmonically enriched multiscale coarse space (HEM) for domain decomposition methods. For a coercive high contrast model problem, we show how to enrich the coarse space so that the method is robust against any variations…

Numerical Analysis · Mathematics 2015-12-17 Martin J. Gander , Atle Loneland , Talal Rahman

Subspace clustering algorithms are notorious for their scalability issues because building and processing large affinity matrices are demanding. In this paper, we introduce a method that simultaneously learns an embedding space along…

Computer Vision and Pattern Recognition · Computer Science 2018-11-06 Tong Zhang , Pan Ji , Mehrtash Harandi , Richard Hartley , Ian Reid

We present a finite-temperature extension of density matrix embedding theory (FT-DMET) for realistic crystalline systems. We describe a practical framework for constructing extended bath orbitals, solving the embedding problem, and…

Computational Physics · Physics 2026-01-06 Laurence Giordano , Y. Stanley Tan , Zhi-Hao Cui , Chong Sun

Electronic structure calculation of atoms and molecules, in the past few decades has largely been dominated by density functional methods. This is primarily due to the fact that this can account for electron correlation effects in a…

Chemical Physics · Physics 2013-07-12 Amlan K. Roy

Discrete Element Methods (DEM), i.e.~the simulation of many rigid particles, suffer from very stiff differential equations plus multiscale challenges in space and time. The particles move smoothly through space until they interact almost…

Mathematical Software · Computer Science 2023-09-28 Peter Noble , Tobias Weinzierl

Density functional theory (DFT) embedding provides a formally exact framework for interfacing correlated wave-function theory (WFT) methods with lower-level descriptions of electronic structure. Here, we report techniques to improve the…

Chemical Physics · Physics 2015-06-12 Jason D. Goodpaster , Taylor A. Barnes , Frederick R. Manby , Thomas F. Miller

We introduce a new class of multilevel, adaptive, dual-space methods for computing fast convolutional transforms. These methods can be applied to a broad class of kernels, from the Green's functions for classical partial differential…

Numerical Analysis · Mathematics 2023-09-12 Shidong Jiang , Leslie Greengard

A quantitative description of the excited electronic states of point defects and impurities is crucial for understanding materials properties, and possible applications of defects in quantum technologies. This is a considerable challenge…

Network embedding has recently attracted lots of attentions in data mining. Existing network embedding methods mainly focus on networks with pairwise relationships. In real world, however, the relationships among data points could go beyond…

Social and Information Networks · Computer Science 2018-02-01 Ke Tu , Peng Cui , Xiao Wang , Fei Wang , Wenwu Zhu

In this paper, we propose a unified framework for sampling, clustering and embedding data points in semi-metric spaces. For a set of data points $\Omega=\{x_1, x_2, \ldots, x_n\}$ in a semi-metric space, we consider a complete graph with…

Social and Information Networks · Computer Science 2017-08-02 Chia-Tai Chang , Cheng-Shang Chang

Surface crack segmentation poses a challenging computer vision task as background, shape, colour and size of cracks vary. In this work we propose optimized deep encoder-decoder methods consisting of a combination of techniques which yield…

Computer Vision and Pattern Recognition · Computer Science 2021-08-27 Jacob König , Mark Jenkins , Mike Mannion , Peter Barrie , Gordon Morison

Word-embeddings are vital components of Natural Language Processing (NLP) models and have been extensively explored. However, they consume a lot of memory which poses a challenge for edge deployment. Embedding matrices, typically, contain…

Computation and Language · Computer Science 2020-11-12 Vasileios Lioutas , Ahmad Rashid , Krtin Kumar , Md Akmal Haidar , Mehdi Rezagholizadeh

The characterization of high-dimensional entanglement plays a crucial role in the field of quantum information science. Conventional entanglement criteria measuring coherent superpositions of multiple basis states face experimental…

Quantum Physics · Physics 2026-02-12 Jin-Min Liang , Shuheng Liu , Shao-Ming Fei , Qiongyi He

The polarizable embedding (PE) approach is a flexible embedding model where a pre-selected region out of a larger system is described quantum mechanically while the interaction with the surrounding environment is modeled through an…

Chemical Physics · Physics 2017-01-24 Erik D. Hedegård , Markus Reiher

A cardinal obstacle to performing quantum-mechanical simulations of strongly-correlated matter is that, with the theoretical tools presently available, sufficiently-accurate computations are often too expensive to be ever feasible. Here we…

Strongly Correlated Electrons · Physics 2021-02-10 John Rogers , Tsung-Han Lee , Sahar Pakdel , Wenhu Xu , Vladimir Dobrosavljević , Yong-Xin Yao , Ove Christiansen , Nicola Lanatà