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Quantitative analysis of multidimensional biological images is useful for understanding complex cellular phenotypes and accelerating advances in biomedical research. As modern microscopy generates ever-larger 2D and 3D datasets, existing…

Computer Vision and Pattern Recognition · Computer Science 2025-10-17 Alexandr A. Kalinin , Anne E. Carpenter , Shantanu Singh , Matthew J. O'Meara

Adversarial attacks pose a significant challenge to the reliable deployment of machine learning models in EdgeAI applications, such as autonomous driving and surveillance, which rely on resource-constrained devices for real-time inference.…

Cryptography and Security · Computer Science 2026-01-05 Nandish Chattopadhyay , Abdul Basit , Amira Guesmi , Muhammad Abdullah Hanif , Bassem Ouni , Muhammad Shafique

We propose a data-driven framework for efficiently solving quadratic programming (QP) problems by reducing the number of variables in high-dimensional QPs using instance-specific projection. A graph neural network-based model is designed to…

Machine Learning · Statistics 2025-10-31 Tomoharu Iwata , Futoshi Futami

We investigate GPU-based parallelization of Iterative-Deepening A* (IDA*). We show that straightforward thread-based parallelization techniques which were previously proposed for massively parallel SIMD processors perform poorly due to warp…

Artificial Intelligence · Computer Science 2017-05-09 Satoru Horie , Alex Fukunaga

Although deep models have been widely explored in solving partial differential equations (PDEs), previous works are primarily limited to data only with up to tens of thousands of mesh points, far from the million-point scale required by…

Machine Learning · Computer Science 2025-02-10 Huakun Luo , Haixu Wu , Hang Zhou , Lanxiang Xing , Yichen Di , Jianmin Wang , Mingsheng Long

Despite decades of advancements, the simulation of fluids remains one of the most challenging areas of in scientific computing. Supported by the necessity of gradient information in deep learning, differentiable simulators have emerged as…

Machine Learning · Computer Science 2025-10-21 Aleksandra Franz , Hao Wei , Luca Guastoni , Nils Thuerey

The growing complexity of computational workloads has amplified the need for efficient and specialized hardware accelerators. Field Programmable Gate Arrays (FPGAs) and Graphics Processing Units (GPUs) have emerged as prominent solutions,…

Hardware Architecture · Computer Science 2025-11-11 Arnab A Purkayastha , Jay Tharwani , Shobhit Aggarwal

Convex quadratically constrained quadratic programs (QCQPs) involve finding a solution within a convex feasible region defined by quadratic constraints while minimizing a convex quadratic objective function. These problems arise in various…

Optimization and Control · Mathematics 2025-11-25 Chenyang Wu , Qian Chen , Akang Wang , Tian Ding , Ruoyu Sun , Wenguo Yang , Qingjiang Shi

Regular path queries (RPQs) are fundamental for path-constrained reachability analysis, and more complex variants such as conjunctive regular path queries (CRPQs) are increasingly used in graph analytics. Evaluating these queries is…

Databases · Computer Science 2026-02-25 Sungwoo Park , Seohyeon Kim , Min-Soo Kim

Hypergraph partitioning is a recurring NP-hard problem in engineering; its efficient solution at scale hinges on parallelism. This work proposes a GPU-centric algorithm for multi-level hypergraph partitioning aimed at a specific set of…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-05-21 Marco Ronzani , Cristina Silvano

Monte Carlo simulation is widely used to numerically solve stochastic differential equations. Although the method is flexible and easy to implement, it may be slow to converge. Moreover, an inaccurate solution will result when using large…

Numerical Analysis · Mathematics 2023-02-13 Shuaiqiang Liu , Graziana Colonna , Lech A. Grzelak , Cornelis W. Oosterlee

There is a stage in the GPU computing pipeline where a grid of thread-blocks is mapped to the problem domain. Normally, this grid is a k-dimensional bounding box that covers a k-dimensional problem no matter its shape. Threads that fall…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-08-27 Cristobal A. Navarro , Nancy Hitschfeld

A tridiagonal matrix algorithm (TDMA), Pipelined-TDMA, is developed for multi-GPU systems to resolve the scalability bottlenecks caused by the sequential structure of conventional divide-and-conquer TDMA. The proposed method pipelines…

Computational Physics · Physics 2025-09-05 Seungchan Kim , Jihoo Kim , Sanghyun Ha , Donghyun You

Data-driven approaches have been proven effective in solving combinatorial optimization problems over graphs such as the traveling salesman problems and the vehicle routing problem. The rationale behind such methods is that the input…

Artificial Intelligence · Computer Science 2023-08-08 Mina Samizadeh , Guangmo Tong

Modern deep learning applications urge to push the model inference taking place at the edge devices for multiple reasons such as achieving shorter latency, relieving the burden of the network connecting to the cloud, and protecting user…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-07-05 Leyuan Wang , Zhi Chen , Yizhi Liu , Yao Wang , Lianmin Zheng , Mu Li , Yida Wang

In recent years the more and more powerful GPU's available on the PC market have attracted attention as a cost effective solution for parallel (SIMD) computing. CUDA is a solid evidence of the attention that the major companies are devoting…

High Energy Physics - Lattice · Physics 2010-01-21 Viola Anselmi , Giovanni Conti , Francesco Di Renzo

In this work, we consider the solution of boundary integral equations by means of a scalable hierarchical matrix approach on clusters equipped with graphics hardware, i.e. graphics processing units (GPUs). To this end, we extend our…

Mathematical Software · Computer Science 2018-07-02 Helmut Harbrecht , Peter Zaspel

We propose a high-performance GPU solver for inverse homogenization problems to design high-resolution 3D microstructures. Central to our solver is a favorable combination of data structures and algorithms, making full use of the parallel…

Optimization and Control · Mathematics 2023-05-26 Di Zhang , Xiaoya Zhai , Ligang Liu , Xiao-Ming Fu

Designing and implementing efficient, provably correct parallel neural network processing is challenging. Existing high-level parallel abstractions like MapReduce are insufficiently expressive while low-level tools like MPI and Pthreads…

Machine Learning · Computer Science 2016-06-21 Maohua Zhu , Liu Liu , Chao Wang , Yuan Xie

We present a general approach to batching arbitrary computations for accelerators such as GPUs. We show orders-of-magnitude speedups using our method on the No U-Turn Sampler (NUTS), a workhorse algorithm in Bayesian statistics. The central…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-03-13 Alexey Radul , Brian Patton , Dougal Maclaurin , Matthew D. Hoffman , Rif A. Saurous