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Related papers: Profiles for ion activities are multiphasic, not c…

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A wide variety of biological as well as non-biological processes and phenomena involving ion channels, binding, pH, folding/unfolding and effects of chain length are well represented by multiphasic profiles, a series of straight lines…

Biological Physics · Physics 2015-12-08 Per Nissen

When plotted in linear transformations of the Michaelis-Menten equation, ion uptake in plants has been shown to be multiphasic, i.e. to be represented by a series of straight lines separated by discontinuous transitions (Nissen 1971, 1974,…

Biological Physics · Physics 2017-12-06 Per Nissen

The preceding paper (Nissen 2017) shows multiphasic profiles, straight lines separated by discontinuous transitions, for the ion activities of NaCl and KCl at 15, 25, 35 and 45oC based on very precise tabular data of Lee et al. (2002). In…

Biological Physics · Physics 2017-12-20 Per Nissen

Data for voltage-activation of a potassium channel (Matulef et al. Proc Natl Acad Sci USA 110: 17886-17891. 2013) were, as conventionally done, fitted by the authors by a Boltzmann function, i.e. by a curvilinear profile. Reanalysis of the…

Biological Physics · Physics 2016-03-17 Per Nissen

Ion conducting polymers have a biphasic character with crystalline as well as amorphous phases. There is moreover, a dynamic disorder due to motion of polymer chain segments. The PEO-NH$_4$ClO$_4$ system undergoes a crossover from a…

Condensed Matter · Physics 2009-10-31 Sarmishtha Mandal , S. Tarafdar , Aninda Jiban Bhattacharyya

Reanalysis of data (Bruice and York 1961) for the pH dependences of the calculated apparent second-order rate constants (k2) for the reaction of tris-(hydroxymethyl)-aminomethane (TRIS) with phenyl esters reveals that the pH profiles are…

Chemical Physics · Physics 2015-12-09 Per Nissen

Ions in water are the liquid of life. Life occurs almost entirely in 'salt water'. Water itself (without ions) is lethal to animal cells and damaging for most proteins. Water must contain the right ions in the right amounts if it is to…

Biomolecules · Quantitative Biology 2010-09-10 Bob Eisenberg

The movement of ionic solutions is an essential part of biology and technology. Fluidics, from nano- to micro- to microfluidics, is a burgeoning area of technology which is all about the movement of ionic solutions, on various scales. Many…

Quantitative Methods · Quantitative Biology 2018-06-08 Shixin Xu , Bob Eisenberg , Zilong Song , Huaxiong Huang

Ionic transport in nanopores is a fundamentally and technologically important problem in view of its occurrence in biological processes and its impact on novel DNA sequencing applications. Using microscopic calculations, here we show that…

Soft Condensed Matter · Physics 2009-09-26 Michael Zwolak , Johan Lagerqvist , Massimiliano Di Ventra

For sufficiently short relativistic-intensity laser pulses, the disparity in time scales for electron and ion motion causes ions to behave as a fixed, neutralizing background. As the pulse duration or intensity is increased, ion motion…

In a structural analysis of the proteasome activator PafE in Mycobacterium tuberculosis, the binding of the activator or shorter constructs to the 20S proteasome core particle (20S CP) or derivatives was measured by isothermal titration…

Biological Physics · Physics 2016-06-30 Per Nissen

Cold ions in anisotropic harmonic potentials can form ion chains of various sizes. Here, the density of ions is not uniform, thus the eigenmodes are not phononic-like waves. We study chains of N>>1 ions and evaluate analytically the long…

Statistical Mechanics · Physics 2009-11-10 Giovanna Morigi , Shmuel Fishman

Irradiation of cell monolayers by monoenergetic ions has made it possible to establish survival curves at individual values of linear energy transfer. The two-step model of radiobiological mechanism proposed recently by Judas and Lokajicek…

Medical Physics · Physics 2007-05-23 Pavel Kundrat , Milos Lokajicek , Hana Hromcikova

In this chapter, the anatomy of an ion source is briefly described, as well as a few features of particle motion in electric and magnetic fields, and of particle dynamics and plasmas. Using this information, different types of ion sources…

Accelerator Physics · Physics 2014-04-04 R. Scrivens

Wave-particle interaction is a key process in particle diffusion in collisionless plasmas. We look into the interaction of single plasma waves with individual particles and discuss under which circumstances this is a chaotic process,…

Plasma Physics · Physics 2018-02-01 Cedric Schreiner , Rami Vainio , Felix Spanier

Clays control carbon, water and nutrient transport in the lithosphere, promote cloud formation5 and lubricate fault slip through interactions among hydrated mineral interfaces. Clay mineral properties are difficult to model because their…

Classical thermodynamics and statistical mechanics describe systems in which nothing interacts with nothing. Even the highly refined theory of simple fluids does not deal very well with electrical interactions, boundary conditions, or…

Other Quantitative Biology · Quantitative Biology 2012-08-31 Bob Eisenberg

An important question in understanding the structure of ionic liquids is whether ions are truly "free" and mobile which would correspond to a concentrated ionic melt, or are rather "bound" in ion pairs, that is a liquid of ion pairs with a…

Soft Condensed Matter · Physics 2014-12-30 Alpha A Lee , Dominic Vella , Susan Perkin , Alain Goriely

The static dielectric properties of dense ionic fluids, e.g., room temperature ionic liquids (RTILs) and inorganic fused salts, are investigated on different length scales by means of grandcanonical Monte Carlo simulations. A generally…

Soft Condensed Matter · Physics 2015-05-14 Grigory Zarubin , Markus Bier

We study the spatio-temporal dynamics of a model of polar active fluid in two dimensions. The system exhibits a transition from an isotropic to a polarized state as a function of density. The uniform polarized state is, however, unstable…

Soft Condensed Matter · Physics 2011-12-08 Luca Giomi , M. Cristina Marchetti
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