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We analyze the critical connectivity of systems of penetrable $d$-dimensional spheres having size distributions in terms of weighed random geometrical graphs, in which vertex coordinates correspond to random positions of the sphere centers…

Statistical Mechanics · Physics 2015-08-11 Claudio Grimaldi

A common starting point for drug design is to find small chemical groups or "fragments" that form interactions with distinct subregions in a protein binding pocket. The subsequent challenge is to assemble these fragments into a molecule…

Quantitative Methods · Quantitative Biology 2025-05-29 Rohan V. Koodli , Alexander S. Powers , Ayush Pandit , Chiho Im , Ron O. Dror

In this paper we study the component structure of random graphs with independence between the edges. Under mild assumptions, we determine whether there is a giant component, and find its asymptotic size when it exists. We assume that the…

Probability · Mathematics 2010-06-29 Bela Bollobas , Svante Janson , Oliver Riordan

Scaled Relative Graphs (SRGs) provide a novel graphical frequency-domain method for the analysis of nonlinear systems. However, we show that the current SRG analysis suffers from a pitfall that limit its applicability in analyzing practical…

Systems and Control · Electrical Eng. & Systems 2025-04-14 Julius P. J. Krebbekx , Roland Tóth , Amritam Das

We consider a formal discretisation of Euclidean quantum gravity defined by a statistical model of random $3$-regular graphs and making using of the Ollivier curvature, a coarse analogue of the Ricci curvature. Numerical analysis shows that…

High Energy Physics - Theory · Physics 2021-03-09 Christy Kelly , Carlo Trugenberger , Fabio Biancalana

A unit ball graph consists of a set of vertices, labeled by points in Euclidean space, and edges joining all pairs of points within distance 1. These geometric graphs are used to model a variety of spatial networks, including communication…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-08-07 Calum Buchanan , Puck Rombach , James Bagrow , Hamid R. Ossareh

We consider the problem of determining the proportion of edges that are discovered in an Erdos-Renyi graph when one constructs all shortest paths from a given source node to all other nodes. This problem is equivalent to the one of…

Statistical Mechanics · Physics 2009-11-13 Vincent D. Blondel , Jean-Loup Guillaume , Julien M. Hendrickx , Raphael M. Jungers

Random graph (RG) models play a central role in the complex networks analysis. They help to understand, control, and predict phenomena occurring, for instance, in social networks, biological networks, the Internet, etc. Despite a large…

Social and Information Networks · Computer Science 2024-03-22 Mikhail Drobyshevskiy , Denis Turdakov

When studying networks using random graph models, one is sometimes faced with situations where the notion of adjacency between nodes reflects multiple constraints. Traditional random graph models are insufficient to handle such situations.…

Information Theory · Computer Science 2008-09-10 N. Prasanth Anthapadmanabhan , Armand M. Makowski

Spin (spherical) random fields are very important in many physical applications, in particular they play a key role in Cosmology, especially in connection with the analysis of the Cosmic Microwave Background radiation. These objects can be…

Probability · Mathematics 2022-07-19 Antonio Lerario , Domenico Marinucci , Maurizia Rossi , Michele Stecconi

Due to the fact that the numbers of annually published papers have witnessed a linear growth in some citation networks, a geometric model is thus proposed to predict some statistical features of those networks, in which the academic…

Physics and Society · Physics 2016-07-07 Qi Liu , Zheng Xie , Engming Dong , Jianping Li

This paper introduces and demonstrates a computational pipeline for the statistical analysis of shape graph datasets, namely geometric networks embedded in 2D or 3D spaces. Unlike traditional abstract graphs, our purpose is not only to…

Machine Learning · Computer Science 2026-02-19 Murad Hossen , Demetrio Labate , Nicolas Charon

We study the richness of the ensemble of graphical structures (i.e., unlabeled graphs) of the one-dimensional random geometric graph model defined by $n$ nodes randomly scattered in $[0,1]$ that connect if they are within the connection…

Information Theory · Computer Science 2022-06-24 Mihai-Alin Badiu , Justin P. Coon

In this report, the explicit probability density functions of the random Euclidean distances associated with regular hexagons are given, when the two endpoints of a link are randomly distributed in the same hexagon, and two adjacent…

General Mathematics · Mathematics 2021-01-26 Yanyan Zhuang , Jianping Pan

Random geometric graphs consist of randomly distributed nodes (points), with pairs of nodes within a given mutual distance linked. In the usual model the distribution of nodes is uniform on a square, and in the limit of infinitely many…

Disordered Systems and Neural Networks · Physics 2018-09-27 Carl P. Dettmann

How does one generalize differential geometric constructs such as curvature of a manifold to the discrete world of graphs and other combinatorial structures? This problem carries significant importance for analyzing models of discrete…

Combinatorics · Mathematics 2023-06-27 J. F. Du Plessis , Xerxes D. Arsiwalla

In this paper we explore mathematical tools that can be used to relate directed and undirected random graph models to each other. We identify probability spaces on which a directed and an undirected graph model are equivalent, and…

Probability · Mathematics 2025-03-03 Mike van Santvoort , Pim van der Hoorn

Graph kernels are widely used for measuring the similarity between graphs. Many existing graph kernels, which focus on local patterns within graphs rather than their global properties, suffer from significant structure information loss when…

Machine Learning · Computer Science 2019-12-02 Lingfei Wu , Ian En-Hsu Yen , Zhen Zhang , Kun Xu , Liang Zhao , Xi Peng , Yinglong Xia , Charu Aggarwal

Hyperbolic random graphs (HRG) and geometric inhomogeneous random graphs (GIRG) are two similar generative network models that were designed to resemble complex real world networks. In particular, they have a power-law degree distribution…

Data Structures and Algorithms · Computer Science 2019-08-26 Thomas Bläsius , Tobias Friedrich , Maximilian Katzmann , Ulrich Meyer , Manuel Penschuck , Christopher Weyand

In this article, we consider `$N$'spherical caps of area $4\pi p$ were uniformly distributed over the surface of a unit sphere. We study the random intersection graph $G_N$ constructed by these caps. We prove that for $p =…

Probability · Mathematics 2008-09-09 Bhupendra gupta