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In many Bayesian inverse problems the goal is to recover a spatially varying random field. Such problems are often computationally challenging especially when the forward model is governed by complex partial differential equations (PDEs).…

Numerical Analysis · Mathematics 2022-11-09 Zhihang Xu , Qifeng Liao , Jinglai Li

We present the open source distributed software package Poisson-Boltzmann Analytical Method (PB-AM), a fully analytical solution to the linearized Poisson Boltzmann equation, for molecules represented as non-overlapping spherical cavities.…

Biomolecules · Quantitative Biology 2016-09-27 Lisa E. Feldberg , David H. Brookes , Eng-Hui Yap , Elizabeth Jurrus , Nathan Baker , Teresa Head-Gordon

We study the boundary layer solution to singular perturbation problems involving Poisson-Boltzmann (PB) type equations with a small parameter $\epsilon$ in general bounded smooth domains (including multiply connected domains) under the…

Analysis of PDEs · Mathematics 2025-06-27 Jhih-Hong Lyu , Tai-Chia Lin

This paper proposes a domain decomposition subspace neural network method for efficiently solving linear and nonlinear partial differential equations. By combining the principles of domain decomposition and subspace neural networks, the…

Numerical Analysis · Mathematics 2025-05-28 Zhenxing Fu , Hongliang Liu , Zhiqiang Sheng , Baixue Xing

The first domain decomposition methods for partial differential equations were already developed in 1870 by H. A. Schwarz. Here we consider a nonlocal Dirichlet problem with variable coefficients, where a nonlocal diffusion operator is…

Numerical Analysis · Mathematics 2024-05-06 Matthias Schuster , Christian Vollmann , Volker Schulz

This paper is concerned with global-in-time, nonoverlapping domain decomposition methods for the mixed formulation of the diffusion problem. Two approaches are considered: one uses the time-dependent Steklov-Poincar\'e operator and the…

Numerical Analysis · Mathematics 2013-12-30 Thi Thao Phuong Hoang , Jérôme Jaffré , Caroline Japhet , Michel Kern , Jean Roberts

A variational approach is used to develop a robust numerical procedure for solving the nonlinear Poisson-Boltzmann equation. Following Maggs et al., we construct an appropriate constrained free energy functional, such that its…

Soft Condensed Matter · Physics 2020-04-29 M. Baptista , R. Schmitz , B. Duenweg

In this paper we propose on continuous level several domain decomposition methods to solve unilateral and ideal multibody contact problems of nonlinear elasticity. We also present theorems about convergence of these methods.

Numerical Analysis · Mathematics 2012-09-07 Ihor I. Prokopyshyn , Ivan I. Dyyak , Rostyslav M. Martynyak , Ivan A. Prokopyshyn

This paper deals with two domain decomposition methods for two dimensional linear Schr{\"o}dinger equation, the Schwarz waveform relaxation method and the domain decomposition in space method. After presenting the classical algorithms, we…

Numerical Analysis · Mathematics 2016-03-11 Christophe Besse , Feng Xing

Discontinuous Petrov-Galerkin (DPG) methods are new discontinuous Galerkin methods with interesting properties. In this article we consider a domain decomposition preconditioner for a DPG method for the Poisson problem.

Numerical Analysis · Mathematics 2012-12-13 Andrew T. Barker , Susanne C. Brenner , Eun-Hee Park , Li-Yeng Sung

A new numerical domain decomposition method is proposed for solving elliptic equations on compact Riemannian manifolds. The advantage of this method is to avoid global triangulations or grids on manifolds. Our method is numerically tested…

Numerical Analysis · Mathematics 2024-02-23 Shuhao Cao , Lizhen Qin

A strategy to construct physics-based local surrogate models for parametric Stokes flows and coupled Stokes-Darcy systems is presented. The methodology relies on the proper generalized decomposition (PGD) method to reduce the dimensionality…

Numerical Analysis · Mathematics 2026-03-16 Marco Discacciati , Ben J. Evans , Matteo Giacomini

We present a meshless Schwarz-type non-overlapping domain decomposition method based on artificial neural networks for solving forward and inverse problems involving partial differential equations (PDEs). To ensure the consistency of…

Machine Learning · Computer Science 2023-07-25 Shamsulhaq Basir , Inanc Senocak

The non-linear Poisson-Boltzmann equation for a circular, uniformly charged platelet, confined together with co- and counter-ions to a cylindrical cell, is solved semi-analytically by transforming it into an integral equation and solving…

Soft Condensed Matter · Physics 2009-10-31 R. J. F. Leote de Carvalho , E. Trizac , J. P Hansen

The size-modified Poisson-Boltzmann (MPB) equation is an efficient implicit solvation model which also captures electrolytic solvent effects. It combines an account of the dielectric solvent response with a mean-field description of…

Materials Science · Physics 2016-06-30 Stefan Ringe , Harald Oberhofer , Christoph Hille , Sebastian Matera , Karsten Reuter

We examine the use of the Dirichlet-to-Neumann coarse space within an additive Schwarz method to solve the Helmholtz equation in 2D. In particular, we focus on the selection of how many eigenfunctions should go into the coarse space. We…

Numerical Analysis · Mathematics 2021-07-08 Niall Bootland , Victorita Dolean

Convergence is proven for Schwarz-like methods applied to degenerate elliptic-parabolic equations with a $p$-structure. This family of PDEs, e.g., arises when modelling nonlinear diffusion processes. The Schwarz-like approximation methods…

Numerical Analysis · Mathematics 2026-05-07 Monika Eisenmann , Eskil Hansen

In this paper, we propose and test a novel diagonal sweeping domain decomposition method (DDM) with source transfer for solving the high-frequency Helmholtz equation in $\mathbb{R}^n$. In the method the computational domain is partitioned…

Numerical Analysis · Mathematics 2020-09-02 Wei Leng , Lili Ju

In this paper we propose on continuous level a class of domain decomposition methods of Robin-Robin type to solve the problems of unilateral contact between elastic bodies with nonlinear Winkler covers. These methods are based on abstract…

Numerical Analysis · Mathematics 2012-12-03 Ihor I. Prokopyshyn , Ivan I. Dyyak , Rostyslav M. Martynyak , Ivan A. Prokopyshyn

With recent advancements in computer hardware and software platforms, there has been a surge of interest in solving partial differential equations with deep learning-based methods, and the integration with domain decomposition strategies…

Numerical Analysis · Mathematics 2023-05-18 Qi Sun , Xuejun Xu , Haotian Yi