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Vines and vineyard connecting a stack of persistence diagrams have been introduced in the non-zigzag setting by Cohen-Steiner et al. We consider computing these vines over changing filtrations for zigzag persistence while incorporating two…

Computational Geometry · Computer Science 2024-02-20 Tamal K. Dey , Tao Hou

Assume that a finite set of points is randomly sampled from a subspace of a metric space. Recent advances in computational topology have provided several approaches to recovering the geometric and topological properties of the underlying…

Algebraic Topology · Mathematics 2021-01-29 Peter Bubenik , Peter T. Kim

Determining whether two graphs are isomorphic is a fundamental problem with practical applications in areas such as molecular chemistry or social network analysis, yet it remains a challenging task, with exact solutions often being…

Persistent homology is a popular technique in topological data analysis that tracks the lifespans of homological features in a nested sequence of spaces. This data is typically presented in a multi-set called a persistence diagram or a…

Algebraic Topology · Mathematics 2025-11-26 Deni Salja

Given a zigzag filtration, we want to find its barcode representatives, i.e., a compatible choice of bases for the homology groups that diagonalize the linear maps in the zigzag. To achieve this, we convert the input zigzag to a levelset…

Computational Geometry · Computer Science 2025-02-26 Tamal K. Dey , Tao Hou , Dmitriy Morozov

We introduce a new invariant defined on the vertices of a given filtered simplicial complex, called codensity, which controls the impact of removing vertices on persistent homology. We achieve this control through the use of an interleaving…

Algebraic Topology · Mathematics 2018-01-10 Facundo Mémoli , Osman Berat Okutan

To analyze the topological properties of the given discrete data, one needs to consider a continuous transform called filtration. Persistent homology serves as a tool to track changes of homology in the filtration. The outcome of the…

Optimization and Control · Mathematics 2024-10-08 Keunsu Kim , Jae-Hun Jung

A multiparameter filtration, or a multifiltration, may in many cases be seen as the collection of sublevel sets of a vector function, which we call a multifiltering function. The main objective of this paper is to obtain a better…

Geometric Topology · Mathematics 2026-01-01 Guillaume Brouillette

In this work, we develop a pipeline that associates Persistence Diagrams to digital data via the most appropriate filtration for the type of data considered. Using a grid search approach, this pipeline determines optimal representation…

Computer Vision and Pattern Recognition · Computer Science 2023-09-28 Francesco Conti , Davide Moroni , Maria Antonietta Pascali

On a smooth manifold, we associate to any closed differential form a mapping cone complex. The cohomology of this mapping cone complex can vary with the de Rham cohomology class of the closed form. We present a novel Morse theoretical…

Differential Geometry · Mathematics 2024-06-21 David Clausen , Xiang Tang , Li-Sheng Tseng

Stratified digraphs are popular models for feedforward neural networks. However, computation of their path homologies has been limited to low dimensions due to high computational complexity. A recursive algorithm is proposed to compute…

Computational Geometry · Computer Science 2024-12-12 Zhengtong Zhu , Zhiyi Chi

Lossy compression, widely used by scientists to reduce data from simulations, experiments, and observations, can distort features of interest even under bounded error. Such distortions may compromise downstream analyses and lead to…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-01-06 Yuxiao Li , Mingze Xia , Xin Liang , Bei Wang , Robert Underwood , Sheng Di , Hemant Sharma , Dishant Beniwal , Franck Cappello , Hanqi Guo

We introduce a linear dimensionality reduction technique preserving topological features via persistent homology. The method is designed to find linear projection $L$ which preserves the persistent diagram of a point cloud $\mathbb{X}$ via…

Machine Learning · Statistics 2021-06-15 Byeongsu Yu , Kisung You

There has been substantial interest in developing Markov chain Monte Carlo algorithms based on piecewise-deterministic Markov processes. However existing algorithms can only be used if the target distribution of interest is differentiable…

Statistics Theory · Mathematics 2021-11-12 Augustin Chevallier , Sam Power , Andi Q. Wang , Paul Fearnhead

Multiparameter persistent homology has emerged as a powerful generalization of topological data analysis, capable of encoding multivariate filtrations. However, the algebraic complexity of multiparameter persistence modules, marked by wild…

Algebraic Topology · Mathematics 2026-04-14 Mauricio Angel

We prove the transversality result necessary for defining local Morse chain complexes with finite cyclic group symmetry. Our arguments use special regularized distance functions constructed using classical covering lemmas, and an inductive…

Symplectic Geometry · Mathematics 2018-09-18 Doris Hein , Umberto L. Hryniewicz , Leonardo Macarini

Persistence diagrams play a fundamental role in Topological Data Analysis where they are used as topological descriptors of filtrations built on top of data. They consist in discrete multisets of points in the plane $\mathbb{R}^2$ that can…

Computational Geometry · Computer Science 2019-03-25 Frédéric Chazal , Vincent Divol

A central problem in data-driven scientific inquiry is how to interpret structure in noisy, high-dimensional data. Topological data analysis (TDA) provides a solution via persistent homology, which encodes features of interest as…

Algebraic Topology · Mathematics 2026-02-04 Christian Lentz , Gregory Henselman-Petrusek , Lori Ziegelmeier

We rely on the framework of Morse sequences to enable the direct computation of gradient vector fields on simplicial complexes. A Morse sequence is a filtration from a subcomplex $L$ to a complex $K$ via elementary expansions and fillings,…

Discrete Mathematics · Computer Science 2025-09-09 Gilles Bertrand , Laurent Najman

Neural networks and other machine learning models compute continuous representations, while humans communicate with discrete symbols. Reconciling these two forms of communication is desirable to generate human-readable interpretations or to…

Machine Learning · Computer Science 2021-04-05 André F. T. Martins