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In this paper, we define the homological Morse numbers of a filtered cell complex in terms of relative homology of nested filtration pieces, and derive inequalities relating these numbers to the Betti tables of the multi-parameter…

Algebraic Topology · Mathematics 2023-02-01 Andrea Guidolin , Claudia Landi

Although there is no doubt that multi-parameter persistent homology is a useful tool to analyse multi-variate data, efficient ways to compute these modules are still lacking in the available topological data analysis toolboxes. Other issues…

Algebraic Topology · Mathematics 2021-04-15 Asilata Bapat , Robyn Brooks , Celia Hacker , Claudia Landi , Barbara I. Mahler

The aim of this paper is to present a method for computation of persistent homology that performs well at large filtration values. To this end we introduce the concept of filtered covers. We show that the persistent homology of a bounded…

Algebraic Topology · Mathematics 2018-05-29 Nello Blaser , Morten Brun

Matrix reduction is the standard procedure for computing the persistent homology of a filtered simplicial complex with $m$ simplices. Its output is a particular decomposition of the total boundary matrix, from which the persistence diagrams…

Computational Geometry · Computer Science 2023-10-17 Matthew Piekenbrock , Jose A. Perea

We investigate combinatorial dynamical systems on simplicial complexes considered as {\em finite topological spaces}. Such systems arise in a natural way from sampling dynamics and may be used to reconstruct some features of the dynamics…

Algebraic Topology · Mathematics 2018-07-12 Tamal K. Dey , Mateusz Juda , Tomasz Kapela , Jacek Kubica , Michal Lipinski , Marian Mrozek

Boissonnat and Pritam introduced an algorithm to reduce a filtration of flag (or clique) complexes, which can in particular speed up the computation of its persistent homology. They used so-called edge collapse to reduce the input flag…

Computational Geometry · Computer Science 2022-03-15 Marc Glisse , Siddharth Pritam

We construct a zig-zag process targeting a posterior distribution defined on a hybrid state space consisting of both discrete and continuous variables. The construction does not require any assumptions on the structure among discrete…

Computation · Statistics 2024-01-30 Jere Koskela

Computing persistence over changing filtrations give rise to a stack of 2D persistence diagrams where the birth-death points are connected by the so-called `vines'. We consider computing these vines over changing filtrations for zigzag…

Computational Geometry · Computer Science 2022-08-03 Tamal K. Dey , Tao Hou

Inspired by the works of Forman on discrete Morse theory, which is a combinatorial adaptation to cell complexes of classical Morse theory on manifolds, we introduce a discrete analogue of the stratified Morse theory of Goresky and…

Computational Geometry · Computer Science 2019-11-12 Kevin Knudson , Bei Wang

This article introduces an algorithm to compute the persistent homology of a filtered complex with various coefficient fields in a single matrix reduction. The algorithm is output-sensitive in the total number of distinct persistent…

Computational Geometry · Computer Science 2020-01-10 Jean-Daniel Boissonnat , Clément Maria

We introduce the notion of a template for discrete Morse theory. Templates provide a memory efficient approach to the computation of homological invariants (e.g., homology, persistent homology, Conley complexes) of cell complexes. We…

Algebraic Topology · Mathematics 2021-06-30 Shaun Harker , Konstantin Mischaikow , Kelly Spendlove

Understanding the decision-making processes of large language models is critical given their widespread applications. To achieve this, we aim to connect a formal mathematical framework - zigzag persistence from topological data analysis -…

Computation and Language · Computer Science 2025-06-16 Yuri Gardinazzi , Karthik Viswanathan , Giada Panerai , Alessio Ansuini , Alberto Cazzaniga , Matteo Biagetti

Connection matrices are a generalization of Morse boundary operators from the classical Morse theory for gradient vector fields. Developing an efficient computational framework for connection matrices is particularly important in the…

Algebraic Topology · Mathematics 2023-09-26 Tamal K. Dey , Michał Lipiński , Marian Mrozek , Ryan Slechta

We introduce and study A-infinity persistence of a given homology filtration of topological spaces. This is a family, one for each n > 0, of homological invariants which provide information not readily available by the (persistent) Betti…

Algebraic Topology · Mathematics 2017-06-20 Francisco Belchí Guillamón , Aniceto Murillo Mas

In this paper, we propose Quasi Zigzag Persistent Homology (QZPH) as a framework for analyzing time-varying data by integrating multiparameter persistence and zigzag persistence. To this end, we introduce a stable topological invariant that…

Machine Learning · Computer Science 2026-01-21 Tamal K. Dey , Shreyas N. Samaga

Most algorithms for computing persistent homology do so by tracking cycles that represent homology classes. There are many choices of such cycles, and specific choices have found different uses in applications. Although it is known that…

Algebraic Topology · Mathematics 2025-04-01 Dmitriy Morozov , Primoz Skraba

Persistent homology is a popular and powerful tool for capturing topological features of data. Advances in algorithms for computing persistent homology have reduced the computation time drastically -- as long as the algorithm does not…

Computational Geometry · Computer Science 2013-10-03 Ulrich Bauer , Michael Kerber , Jan Reininghaus

Persistent homology was shown by Carlsson and Zomorodian to be homology of graded chain complexes with coefficients in the graded ring $\kk[t]$. As such, the behavior of persistence modules -- graded modules over $\kk[t]$ is an important…

Computational Geometry · Computer Science 2013-02-18 Primoz Skraba , Mikael Vejdemo-Johansson

In the context of discrete Morse theory, we introduce Morse frames, which are maps that associate a set of critical simplexes to all simplexes. The main example of Morse frames are the Morse references. In particular, these Morse references…

Discrete Mathematics · Computer Science 2026-03-30 Gilles Bertrand , Laurent Najman

This research explores a novel paradigm for preserving topological segmentations in existing error-bounded lossy compressors. Today's lossy compressors rarely consider preserving topologies such as Morse-Smale complexes, and the…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-07-08 Yuxiao Li , Xin Liang , Bei Wang , Yongfeng Qiu , Lin Yan , Hanqi Guo