English
Related papers

Related papers: Spatial Embedding Imposes Constraints on the Netwo…

200 papers

Machine learning is yielding unprecedented interest in research and industry, due to recent success in many applied contexts such as image classification and object recognition. However, the deployment of these systems requires huge…

Neural and Evolutionary Computing · Computer Science 2019-10-03 Nassim Abderrahmane , Edgar Lemaire , Benoît Miramond

Brain activity is intrinsically a neural dynamic process constrained by anatomical space. This leads to significant variations in spatial distribution patterns and correlation patterns of neural activity across variable and heterogeneous…

Machine Learning · Computer Science 2026-03-10 Hongjie Jiang , Yifei Tang , Shuqiang Wang

In recent years, there has been increasing interest in developing models and tools to address the complex patterns of connectivity found in brain tissue. Specifically, this is due to a need to understand how emergent properties emerge from…

Neurons and Cognition · Quantitative Biology 2022-04-15 Sean Knight , Navjot Gadda

Vascular networks play a crucial role in understanding brain functionalities. Brain integrity and function, neuronal activity and plasticity, which are crucial for learning, are actively modulated by their local environments, specifically…

Neurons and Cognition · Quantitative Biology 2024-02-28 Jiachen Yao , Nina Hagemann , Qiaojie Xiong , Jianxu Chen , Dirk M. Hermann , Chao Chen

The human connectome represents a network map of the brain's wiring diagram and the pattern into which its connections are organized is thought to play an important role in cognitive function. The generative rules that shape the topology of…

In this work we challenge the main conclusions of Gu et al work (Controllability of structural brain networks. Nature communications 6, 8414, doi:10.1038/ncomms9414, 2015) on brain controllability. Using the same methods and analyses on…

Neurons and Cognition · Quantitative Biology 2018-07-10 Chengyi Tu , Rodrigo P. Rocha , Maurizio Corbetta , Sandro Zampieri , Marzo Zorzi , Samir Suweis

In biological systems, the growth of cells, tissues, and organs is influenced by mechanical cues. Locally, cell growth leads to a mechanically heterogeneous environment as cells pull and push their neighbors in a cell network. Despite this…

Biological Physics · Physics 2021-03-17 Alexander Erlich , Gareth W. Jones , Françoise Tisseur , Derek E. Moulton , Alain Goriely

The field of computational modeling of the brain is advancing so rapidly that now it is possible to model large scale networks representing different brain regions with a high level of biological detail in terms of numbers and synapses. For…

Spatial and temporal resource constraints are critical for both biological and artificial intelligent systems. Here we define differentiable cost terms for breadth, depth, and time within a recurrent convolutional neural network conceived…

Neurons and Cognition · Quantitative Biology 2026-05-26 Eivinas Butkus , Kedar Garzón Gupta , Nikolaus Kriegeskorte

Networked systems display complex patterns of interactions between a large number of components. In physical networks, these interactions often occur along structural connections that link components in a hard-wired connection topology,…

Neurons and Cognition · Quantitative Biology 2018-04-03 Jason Kim , Jonathan M. Soffer , Ari E. Kahn , Jean M. Vettel , Fabio Pasqualetti , Danielle S. Bassett

Neural networks can emulate nonlinear physical systems with high accuracy, yet they may produce physically-inconsistent results when violating fundamental constraints. Here, we introduce a systematic way of enforcing nonlinear analytic…

Computational Physics · Physics 2021-03-10 Tom Beucler , Michael Pritchard , Stephan Rasp , Jordan Ott , Pierre Baldi , Pierre Gentine

The organization of the connectivity between mammalian cortical areas has become a major subject of study, because of its important role in scaffolding the macroscopic aspects of animal behavior and intelligence. In this study we present a…

Neurons and Cognition · Quantitative Biology 2007-05-23 Luciano da F Costa , Marcus Kaiser , Claus C Hilgetag

The topology of city street networks (SNs) is constrained by spatial embedding, requiring non-crossing links and preventing random node placement or overlap. Here, we analyzed SNs of $33$ Indian cities to explore how the spatial embedding…

Physics and Society · Physics 2025-03-26 Ritish Khetarpal , Aradhana Singh

A mechanism for self-organization of the degree of connectivity in model neural networks is studied. Network connectivity is regulated locally on the basis of an order parameter of the global dynamics which is estimated from an observable…

Statistical Mechanics · Physics 2009-11-07 Stefan Bornholdt , Torsten Roehl

Real networks are finite metric spaces. Yet the geometry induced by shortest path distances in a network is definitely not its only geometry. Other forms of network geometry are the geometry of latent spaces underlying many networks, and…

A central idea in understanding brains and building artificial intelligence is that structure determines function. Yet, how the brain's complex structure arises from a limited set of genetic instructions remains a key question. The ultra…

Neurons and Cognition · Quantitative Biology 2026-01-28 Xingyu Liu , Yubin Li , Guozhang Chen

Statistical neurodynamics studies macroscopic behaviors of randomly connected neural networks. We consider a deep layered feedforward network where input signals are processed layer by layer. The manifold of input signals is embedded in a…

Disordered Systems and Neural Networks · Physics 2018-08-23 Shun-ichi Amari , Ryo Karakida , Masafumi Oizumi

A growing body of research indicates that structural plasticity mechanisms are crucial for learning and memory consolidation. Starting from a simple phenomenological model, we exploit a mean-field approach to develop a theoretical framework…

Neurons and Cognition · Quantitative Biology 2024-06-19 Gianmarco Tiddia , Luca Sergi , Bruno Golosio

Network theory provides novel concepts that promise an improved characterization of interacting dynamical systems. Within this framework, evolving networks can be considered as being composed of nodes, representing systems, and of…

Neurons and Cognition · Quantitative Biology 2014-08-26 Klaus Lehnertz , Gerrit Ansmann , Stephan Bialonski , Henning Dickten , Christian Geier , Stephan Porz

Human mobility in cities is shaped not only by visible structures such as highways, rivers, and parks but also by invisible barriers rooted in socioeconomic segregation, uneven access to amenities, and administrative divisions. Yet…

Computers and Society · Computer Science 2025-07-01 Guangyuan Weng , Minsuk Kim , Yong-Yeol Ahn , Esteban Moro