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Related papers: Small-world networks and RNA secondary structures

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While the emergence of a power law degree distribution in complex networks is intriguing, the degree exponent is not universal. Here we show that the betweenness centrality displays a power-law distribution with an exponent \eta which is…

Statistical Mechanics · Physics 2009-11-07 K. -I. Goh , E. OH , H. Jeong , B. Kahng , D. Kim

We present analytical results for the distribution of shortest path lengths (DSPL) in a network growth model which evolves by node duplication (ND). The model captures essential properties of the structure and growth dynamics of social…

Physics and Society · Physics 2017-09-05 Chanania Steinbock , Ofer Biham , Eytan Katzav

A dynamical model of small-world network, with directed links which describe various correlations in social and natural phenomena, is presented. Random responses of every site to the imput message are introduced to simulate real systems.…

Disordered Systems and Neural Networks · Physics 2009-11-10 Chen-Ping Zhu , Shi-Jie Xiong , Ying-Jie Tian , Lan Li , Ke-Sheng Jiang

In this paper, we studied the research areas of Chinese natural science basic research from a point view of complex network. Two research areas are considered to be connected if they appear in one fund proposal. The explicit network of such…

Physics and Society · Physics 2009-11-11 Jianguo Liu , Yanzhong Dang , Zhongtuo Wang

We study two kinds of weighted networks, weighted small-world (WSW) and weighted scale-free (WSF). The weight $w_{ij}$ of a link between nodes $i$ and $j$ in the network is defined as the product of endpoint node degrees; that is…

Statistical Mechanics · Physics 2009-11-11 Xin-Jian Xu , Zhi-Xi Wu , Ying-Hai Wang

We develop a network in which the natural numbers are the vertices. We use the decomposition of natural numbers by prime numbers to establish the connections. We perform data collapse and show that the degree distribution of these networks…

Statistical Mechanics · Physics 2009-11-10 Gilberto Corso

We study spatial networks constructed by randomly placing nodes on a manifold and joining two nodes with an edge whenever their distance is less than a certain cutoff. We derive the general expression for the connectivity distribution of…

Disordered Systems and Neural Networks · Physics 2009-11-10 Carl Herrmann , Marc Barthelemy , Paolo Provero

It is nearly 20 years since the concept of a small-world network was first quantitatively defined, by a combination of high clustering and short path length; and about 10 years since this metric of complex network topology began to be…

Neurons and Cognition · Quantitative Biology 2016-08-22 Danielle S. Bassett , Edward T. Bullmore

We study the growth of random networks under a constraint that the diameter, defined as the average shortest path length between all nodes, remains approximately constant. We show that if the graph maintains the form of its degree…

Statistical Mechanics · Physics 2007-05-23 Rajan M. Lukose , Lada A. Adamic

Recent renormalization group results predict non self averaging behaviour at criticality for relevant disorder. However, we find strong self averaging(SA) behaviour in the critical region of a quenched Ising model on an ensemble of…

Disordered Systems and Neural Networks · Physics 2007-05-23 Soumen Roy , Somendra M. Bhattacharjee

Real-world networks exhibit prominent hierarchical and modular structures, with various subgraphs as building blocks. Most existing studies simply consider distinct subgraphs as motifs and use only their numbers to characterize the…

Social and Information Networks · Computer Science 2019-12-17 Qi Xuan , Jinhuan Wang , Minghao Zhao , Junkun Yuan , Chenbo Fu , Zhongyuan Ruan , Guanrong Chen

The global clustering coefficient is an effective measure for analyzing and comparing the structures of complex networks. The random annulus graph is a modified version of the well-known Erd\H{o}s-R\'{e}nyi random graph. It has been…

Methodology · Statistics 2025-10-20 Mingao Yuan

We view the folding of RNA-sequences as a map that assigns a pattern of base pairings to each sequence, known as secondary structure. These preimages can be constructed as random graphs (i.e. the neutral networks associated to the structure…

adap-org · Physics 2008-02-03 Christian V. Forst , Christian Reidys , Jacqueline Weber

Small-world networks provide an interesting framework for studying the interplay between regular and random graphs, where links are located in a regular and random way, respectively. On one hand, the random links make the model to obey some…

Statistical Mechanics · Physics 2024-04-12 M. Ostilli

Networks in nature are often formed within a spatial domain in a dynamical manner, gaining links and nodes as they develop over time. We propose a class of spatially-based growing network models and investigate the relationship between the…

Physics and Society · Physics 2013-12-30 Ari Zitin , Alex Gorowora , Shane Squires , Mark Herrera , Thomas M. Antonsen , Michelle Girvan , Edward Ott

Complex networks as the World Wide Web, the web of human sexual contacts or criminal networks often do not have an engineered architecture but instead are self-organized by the actions of a large number of individuals. From these local…

Disordered Systems and Neural Networks · Physics 2007-05-23 Holger Ebel , Joern Davidsen , Stefan Bornholdt

Given a random RNA secondary structure, $S$, we study RNA sequences having fixed ratios of nuclotides that are compatible with $S$. We perform this analysis for RNA secondary structures subject to various base pairing rules and minimum arc-…

Combinatorics · Mathematics 2016-03-14 Christopher L. Barrett , Thomas J. X. Li , Christian M. Reidys

We consider shallow (single hidden layer) neural networks and characterize their performance when trained with stochastic gradient descent as the number of hidden units $N$ and gradient descent steps grow to infinity. In particular, we…

Machine Learning · Statistics 2022-06-02 Jiahui Yu , Konstantinos Spiliopoulos

In this paper, firstly, we study analytically the topological features of a family of hierarchical lattices (HLs) from the view point of complex networks. We derive some basic properties of HLs controlled by a parameter $q$. Our results…

Statistical Mechanics · Physics 2007-05-23 Zhongzhi Zhang , Shuigeng Zhou , Tao Zou

Many real-world networks exhibit scale-free feature, have a small diameter and a high clustering tendency. We have studied the properties of a growing network, which has all these features, in which an incoming node is connected to its…

Statistical Mechanics · Physics 2009-11-10 Parongama Sen , S. S. Manna
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