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The persistence diagram (PD) is an increasingly popular topological descriptor. By encoding the size and prominence of topological features at varying scales, the PD provides important geometric and topological information about a space.…

Given a multiparameter filtration of simplicial complexes, we consider the problem of explicitly constructing generators for the multipersistent homology groups with arbitrary PID coefficients. We propose the use of spanning trees as a tool…

Algebraic Topology · Mathematics 2025-01-22 Fritz Grimpen , Anastasios Stefanou

Persistent homology is a crucial invariant that is used in many areas to understand data. The $O(N^4)$ run time is a hindrance to its use on most large datasets. We give a parallelization method to utilize multi-core machines and clusters.…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-03-10 Michael G. Rawson

Zigzag persistent homology is a powerful generalisation of persistent homology that allows one not only to compute persistence diagrams with less noise and using less memory, but also to use persistence in new fields of application.…

Computational Geometry · Computer Science 2016-08-23 Clément Maria , Steve Oudot

Persistence diagrams have been widely used to quantify the underlying features of filtered topological spaces in data visualization. In many applications, computing distances between diagrams is essential; however, computing these distances…

Computational Geometry · Computer Science 2021-08-12 Yu Qin , Brittany Terese Fasy , Carola Wenk , Brian Summa

We introduce a linear dimensionality reduction technique preserving topological features via persistent homology. The method is designed to find linear projection $L$ which preserves the persistent diagram of a point cloud $\mathbb{X}$ via…

Machine Learning · Statistics 2021-06-15 Byeongsu Yu , Kisung You

We develop a method for measuring homology classes. This involves three problems. First, we define the size of a homology class, using ideas from relative homology. Second, we define an optimal basis of a homology group to be the basis…

Computational Geometry · Computer Science 2008-02-21 Chao Chen , Daniel Freedman

A standard way of approximating or discretizing a metric space is by taking its Rips complexes. These approximations for all parameters are often bound together into a filtration, to which we apply the fundamental group or the first…

Geometric Topology · Mathematics 2020-03-10 Žiga Virk

Randomized parallel algorithms for many fundamental problems achieve optimal linear work in expectation, but upgrading this guarantee to hold with high probability (whp) remains a recurring theoretical challenge. In this paper, we address…

Data Structures and Algorithms · Computer Science 2026-03-03 Chase Hutton , Adam Melrod

We solve the problems of detecting and counting various forms of regularities in a string represented as a Straight Line Program (SLP). Given an SLP of size $n$ that represents a string $s$ of length $N$, our algorithm compute all runs and…

Data Structures and Algorithms · Computer Science 2013-04-29 Tomohiro I , Wataru Matsubara , Kouji Shimohira , Shunsuke Inenaga , Hideo Bannai , Masayuki Takeda , Kazuyuki Narisawa , Ayumi Shinohara

Given a simplicial complex with weights on its simplices, and a nontrivial cycle on it, we are interested in finding the cycle with minimal weight which is homologous to the given one. Assuming that the homology is defined with integer…

Algebraic Topology · Mathematics 2011-01-28 Tamal K. Dey , Anil N. Hirani , Bala Krishnamoorthy

Persistent homology is a topological data analysis tool that has been widely generalized, extending its scope beyond the field of topology. Among its extensions, steady and ranging persistence were developed to study a wide variety of graph…

Algebraic Topology · Mathematics 2026-05-15 Yann-Situ Gazull

Persistent homology is a natural tool for probing the topological characteristics of weighted graphs, essentially focusing on their $0$-dimensional homology. While this area has been substantially studied, we present a new approach to…

Algebraic Topology · Mathematics 2023-10-03 Omer Bobrowski , Primoz Skraba

Motivated by persistent homology and topological data analysis, we consider formal sums on a metric space with a distinguished subset. These formal sums, which we call persistence diagrams, have a canonical 1-parameter family of metrics…

Algebraic Topology · Mathematics 2025-02-19 Peter Bubenik , Iryna Hartsock

A persistence module $M$, with coefficients in a field $\mathbb{F}$, is a finite-dimensional linear representation of an equioriented quiver of type $A_n$ or, equivalently, a graded module over the ring of polynomials $\mathbb{F}[x]$. It is…

Algebraic Topology · Mathematics 2025-11-06 Alessandro De Gregorio , Marco Guerra , Sara Scaramuccia , Francesco Vaccarino

Let $\mathrm{R}$ be a real closed field and $\mathrm{C}$ the algebraic closure of $\mathrm{R}$. We give an algorithm for computing a semi-algebraic basis for the first homology group, $\mathrm{H}_1(S,\mathbb{F})$, with coefficients in a…

Algebraic Geometry · Mathematics 2021-07-20 Saugata Basu , Sarah Percival

Randomized sampling has recently been proven a highly efficient technique for computing approximate factorizations of matrices that have low numerical rank. This paper describes an extension of such techniques to a wider class of matrices…

Numerical Analysis · Mathematics 2015-03-25 Per-Gunnar Martinsson

Persistent homology (PH) encodes global information, such as cycles, and is thus increasingly integrated into graph neural networks (GNNs). PH methods in GNNs typically traverse an increasing sequence of subgraphs. In this work, we first…

Machine Learning · Computer Science 2026-05-15 Mattie Ji , Indradyumna Roy , Vikas Garg

In this paper, based on the embedded homology groups of hypergraphs defined in \cite{h1}, we define the product of hypergraphs and prove the corresponding K\"{u}nneth formula of hypergraphs which can be generalized to the K\"{u}nneth…

Algebraic Topology · Mathematics 2021-02-10 Chong Wang , Shiquan Ren , Jian Liu

In this paper we study the persistent homology associated with topological crackle generated by distributions with an unbounded support. Persistent homology is a topological and algebraic structure that tracks the creation and destruction…

Probability · Mathematics 2018-10-04 Takashi Owada , Omer Bobrowski
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