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Persistent homology is a mathematical tool used for studying the shape of data by extracting its topological features. It has gained popularity in network science due to its applicability in various network mining problems, including…

Algebraic Topology · Mathematics 2023-06-21 Mehmet Emin Aktas , Thu Nguyen , Rakin Riza , Muhammad Ifte Islam , Esra Akbas

We develop a method for measuring and localizing homology classes. This involves two problems. First, we define relevant notions of size for both a homology class and a homology group basis, using ideas from relative homology. Second, we…

Computational Geometry · Computer Science 2007-06-13 Daniel Freedman , Chao Chen

Such modern applications of topology as data analysis and digital image analysis have to deal with noise and other uncertainty. In this environment, topological spaces often appear equipped with a real valued function. Persistence is a…

Algebraic Topology · Mathematics 2011-05-02 Peter Saveliev

In this paper we give a metric construction of a tree which correctly identifies connected components of superlevel sets of $\mathbb{R}$-valued continuous functions $f$ on $X$ and show that it is possible to retrieve the $H_0$-persistent…

Algebraic Topology · Mathematics 2022-04-11 Daniel Perez

Persistent homology is a popular technique in topological data analysis that tracks the lifespans of homological features in a nested sequence of spaces. This data is typically presented in a multi-set called a persistence diagram or a…

Algebraic Topology · Mathematics 2025-11-26 Deni Salja

The persistence barcode is a topological descriptor of data that plays a fundamental role in topological data analysis. Given a filtration of the space of data, a persistence barcode tracks the evolution of its homological features. In this…

Computational Geometry · Computer Science 2024-09-11 Salman Parsa , Bei Wang

We present a parallelizable algorithm for computing the persistent homology of a filtered chain complex. Our approach differs from the commonly used reduction algorithm by first computing persistence pairs within local chunks, then…

Algebraic Topology · Mathematics 2013-03-05 Ulrich Bauer , Michael Kerber , Jan Reininghaus

Let $K$ be a finite simplicial, cubical, delta or CW complex. The persistence map $\mathrm{PH}$ takes a filter $f:K \rightarrow \mathbb{R}$ as input and returns the barcodes $\mathrm{PH}(f)$ of the associated sublevel set persistent…

Computational Geometry · Computer Science 2021-10-29 Jacob Leygonie , Gregory Henselman-Petrusek

We develop an analysis pipeline for characterizing the topology of large scale structure and extracting cosmological constraints based on persistent homology. Persistent homology is a technique from topological data analysis that quantifies…

Cosmology and Nongalactic Astrophysics · Physics 2021-06-14 Matteo Biagetti , Alex Cole , Gary Shiu

Persistent homology is a methodology central to topological data analysis that extracts and summarizes the topological features within a dataset as a persistence diagram; it has recently gained much popularity from its myriad successful…

Applications · Statistics 2023-11-28 Yueqi Cao , Prudence Leung , Anthea Monod

Solving optimization tasks based on functions and losses with a topological flavor is a very active, growing field of research in data science and Topological Data Analysis, with applications in non-convex optimization, statistics and…

Computational Geometry · Computer Science 2021-02-19 Mathieu Carrière , Frédéric Chazal , Marc Glisse , Yuichi Ike , Hariprasad Kannan

We study the grokking phenomenon through the lens of topology. Using persistent homology on point clouds derived from the embedding matrices of a range of models trained on modular arithmetic with varying primes, we identify a clear and…

Machine Learning · Computer Science 2026-05-08 Yifan Tang , Qiquan Wang , Inés García-Redondo , Anthea Monod

Persistent homology, a powerful mathematical tool for data analysis, summarizes the shape of data through tracking topological features across changes in different scales. Classical algorithms for persistent homology are often constrained…

Quantum Physics · Physics 2024-02-28 Bernardo Ameneyro , George Siopsis , Vasileios Maroulas

Persistence diagrams, combining geometry and topology for an effective shape description used in pattern recognition, have already proven to be an effective tool for shape representation with respect to a certainfiltering function.…

Algebraic Topology · Mathematics 2018-12-26 Alessia Angeli , Massimo Ferri , Ivan Tomba

Latent space matching, which consists of matching distributions of features in latent space, is a crucial component for tasks such as adversarial attacks and defenses, domain adaptation, and generative modelling. Metrics for probability…

Machine Learning · Computer Science 2025-03-05 Hiu-Tung Wong , Darrick Lee , Hong Yan

Recently it was shown that, for every fixed k>1, given a finite simply connected simplicial complex X, the kth homotopy group \pi_k(X) can be computed in time polynomial in the number n of simplices of X. We prove that this problem is…

Computational Complexity · Computer Science 2013-04-30 Jiri Matousek

In the field of topological data analysis, persistence modules are used to express geometrical features of data sets. The matching distance $d_\mathcal{M}$ measures the difference between $2$-parameter persistence modules by taking the…

Algebraic Topology · Mathematics 2023-12-08 Håvard Bakke Bjerkevik , Michael Kerber

Multiparameter persistence modules come up naturally in topological data analysis and topological robotics. Given a metric graph $(X,\delta)$, the second configuration space of $(X,\delta)$ with proximity parameters (for example, the…

Algebraic Topology · Mathematics 2023-10-10 Wenwen Li

We study the problems of finding a minimum cycle basis (a minimum weight set of cycles that form a basis for the cycle space) and a minimum homology basis (a minimum weight set of cycles that generates the $1$-dimensional…

Data Structures and Algorithms · Computer Science 2016-07-19 Glencora Borradaile , Erin Wolf Chambers , Kyle Fox , Amir Nayyeri

Recently a new feature representation and data analysis methodology based on a topological tool called persistent homology (and its corresponding persistence diagram summary) has started to attract momentum. A series of methods have been…

Computational Geometry · Computer Science 2019-12-13 Qi Zhao , Yusu Wang