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We study single cell E.coli chemotaxis in a spatio-temporally varying attractant environment. Modeling the attractant concentration in the form of a traveling sine wave, we measure in our simulations, the chemotactic drift velocity of the…

Cell Behavior · Quantitative Biology 2025-06-06 Shobhan Dev Mandal , Sakuntala Chatterjee

Active nematics, in their pure form, have demonstrated a plethora of dynamic and steady state behaviors, including large-scale dynamic structures, collective flows, and intricate multi-spatial temporal dynamics. This complexity further…

Statistical Mechanics · Physics 2024-07-09 Partha Sarathi Mondal , Pawan Kumar Mishra , Tamás Vicsek , Shradha Mishra

We investigate through numerical simulations how a two-dimensional crystal yields and flows under an applied shear. We focus over a range that allows us to both address the response in the limit of an infinitesimal shear rate and describe…

Soft Condensed Matter · Physics 2023-10-10 Federico Ghimenti , Misaki Ozawa , Giulio Biroli , Gilles Tarjus

We consider two systems of active swimmers moving close to a solid surface, one being a living population of wild-type \textit{E. coli} and the other being an assembly of self-propelled Au-Pt rods. In both situations, we have identified two…

Active nematics are microscopically driven liquid crystals that exhibit dynamical steady states characterized by the creation and annihilation of topological defects. Motivated by experimental realizations of such systems made of biopolymer…

Soft Condensed Matter · Physics 2018-09-05 Abhijeet Joshi , Elias Putzig , Aparna Baskaran , Michael Hagan

Multiphase shear flows often show banded structures that affect the global behavior of complex fluids e.g. in microdevices. Here we investigate numerically the banding of emulsions, i.e. the formation of regions of high and low volume…

Fluid Dynamics · Physics 2020-04-30 Francesco De Vita , Marco Edoardo Rosti , Sergio Caserta , Luca Brandt

We study the dynamical properties of an active particle subject to a swimming speed explicitly depending on the particle position. The oscillating spatial profile of the swim velocity considered in this paper takes inspiration from…

Soft Condensed Matter · Physics 2022-03-15 Lorenzo Caprini , Umberto Marini Bettolo Marconi , René Wittmann , Hartmut Löwen

The study of liquid crystals at equilibrium has led to fundamental insights into the nature of ordered materials, as well as to practical applications such as display technologies. Active nematics are a fundamentally different class of…

Soft Condensed Matter · Physics 2015-08-19 Stephen J. DeCamp , Gabriel S. Redner , Aparna Baskaran , Michael F. Hagan , Zvonimir Dogic

A paradigm for internally driven matter is the active nematic liquid crystal, whereby the equations of a conventional nematic are supplemented by a minimal active stress that violates time reversal symmetry. In practice, active fluids may…

Soft Condensed Matter · Physics 2015-12-15 E. J. Hemingway , A. Maitra , S. Banerjee , M. C. Marchetti , S. Ramaswamy , S. M. Fielding , M. E. Cates

Active matter comprises individually driven units that convert locally stored energy into mechanical motion. Interactions between driven units lead to a variety of non-equilibrium collective phenomena in active matter. One of such phenomena…

Soft Condensed Matter · Physics 2021-06-15 Mingji Huang , Wensi Hu , Siyuan Yang , Quan-Xing Liu , H. P. Zhang

Using agent-based simulations of self-propelled particles subject to short-range repulsion and nematic alignment we explore the dynamical phases of a dense active material confined to the surface of a sphere. We map the dynamical phase…

Soft Condensed Matter · Physics 2018-04-25 Silke Henkes , M. Cristina Marchetti , Rastko Sknepnek

We establish through numerical simulation conditions for optimal undulatory propulsion for a single fish, and for a pair of hydrodynamically interacting fish, accounting for linear and angular recoil. We first employ systematic 2D…

Fluid Dynamics · Physics 2017-04-05 Audrey P. Maertens , Amy Gao , Michael S. Triantafyllou

A bulk metallic glass forming alloy is subjected to shear flow in its supercooled state by compression of a short rod to produce a flat disc. The resulting material exhibits enhanced crystallization kinetics during isothermal annealing as…

Sand is a highly dissipative system, where the local spatial arrangements and densities depend strongly on the applied forces, resulting in fluid-like or solid-like behaviour. This makes sand swimming challenging and intriguing, raising…

Soft Condensed Matter · Physics 2024-04-23 Inaki Echeverría-Huarte , Margarida M. Telo da Gama , Nuno A. M. Araujo

Rheotaxis is a well-known phenomenon among microbial organisms and artificial active colloids, wherein the swimmers respond to an imposed flow. We report the first experimental evidence of upstream rheotaxis by spherical active droplets. It…

Soft Condensed Matter · Physics 2021-08-20 Prateek Dwivedi , Atishay Shrivastava , Dipin Pillai , Rahul Mangal

A systematic experimental study of dispersions of charged colloidal spheres is presented on the effect of steady shear flow on nucleation and crystal-growth rates. In addition, the non-equilibrium phase diagram as far as the melting line is…

Soft Condensed Matter · Physics 2016-08-31 P. Holmqvist , M. P. Lettinga , J. Buitenhuis , J. K. G. Dhont

Interactions between microorganisms and their complex flowing environments are essential in many biological systems. We develop a model for microswimmer dynamics in non-Newtonian Poiseuille flows. We predict that swimmers in…

Soft Condensed Matter · Physics 2016-07-14 Arnold J. T. M. Mathijssen , Tyler N. Shendruk , Julia M. Yeomans , Amin Doostmohammadi

Using a minimal hydrodynamic model, we theoretically and computationally study active gels in straight and annular two-dimensional channels subject to an externally imposed shear. The gels are isotropic in the absence of externally- or…

Soft Condensed Matter · Physics 2023-07-25 Wan Luo , Aparna Baskaran , Robert A. Pelcovits , Thomas R. Powers

A body immersed in a nematic liquid crystal disturbs the fluid's preferred molecular configuration and increases its stored elastic energy. In an active nematic, the fluid components also generate a stress in the bulk fluid. By introducing…

Soft Condensed Matter · Physics 2025-06-17 Thomas G. J. Chandler , Saverio E. Spagnolie

Motivated by the swimming of sperm in the non-Newtonian fluids of the female mammalian reproductive tract, we examine the swimming of filaments in the nonlinear viscoelastic Upper Convected Maxwell model. We obtain the swimming velocity and…

Soft Condensed Matter · Physics 2009-11-13 Henry C. Fu , Thomas R. Powers , Charles W. Wolgemuth