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Many concrete problems are formulated in terms of a finite set of points in $R^n$ which, via the ambient Euclidean metric, becomes a finite metric space. To obtain information from such a space, it is often useful to associate a graph to…

Combinatorics · Mathematics 2022-01-06 Juan M. Alonso

The graph edit distance is used for comparing graphs in various domains. Due to its high computational complexity it is primarily approximated. Widely-used heuristics search for an optimal assignment of vertices based on the distance…

Data Structures and Algorithms · Computer Science 2023-12-08 Franka Bause , Christian Permann , Nils M. Kriege

Homophily is a graph property describing the tendency of edges to connect similar nodes. There are several measures used for assessing homophily but all are known to have certain drawbacks: in particular, they cannot be reliably used for…

Machine Learning · Computer Science 2024-12-16 Mikhail Mironov , Liudmila Prokhorenkova

Built upon the shoulders of graph theory, the field of complex networks has become a central tool for studying real systems across various fields of research. Represented as graphs, different systems can be studied using the same analysis…

Physics and Society · Physics 2024-05-30 Gorka Zamora-López , Matthieu Gilson

Lipman et al. [ACM Transactions on Graphics 29 (3) (2010), 1--11] introduced the concept of biharmonic distance to measure the distances between pairs of points on a 3D surface. Biharmonic distance has some advantages over resistance…

Combinatorics · Mathematics 2022-09-08 Yulong Wei , Rong-hua Li , Weihua Yang

The metric dimension of a graph is the smallest number of nodes required to identify all other nodes based on shortest path distances uniquely. Applications of metric dimension include discovering the source of a spread in a network,…

Combinatorics · Mathematics 2021-04-16 Richard C. Tillquist , Rafael M. Frongillo , Manuel E. Lladser

In many domains where data are represented as graphs, learning a similarity metric among graphs is considered a key problem, which can further facilitate various learning tasks, such as classification, clustering, and similarity search.…

Machine Learning · Computer Science 2020-10-06 Guixiang Ma , Nesreen K. Ahmed , Theodore L. Willke , Philip S. Yu

We develop a new framework for generalizing approximation algorithms from the structural graph algorithm literature so that they apply to graphs somewhat close to that class (a scenario we expect is common when working with real-world…

Graph similarity computation is one of the core operations in many graph-based applications, such as graph similarity search, graph database analysis, graph clustering, etc. Since computing the exact distance/similarity between two graphs…

Machine Learning · Computer Science 2021-05-18 Yunsheng Bai , Hao Ding , Yizhou Sun , Wei Wang

Graph distance metric learning serves as the foundation for many graph learning problems, e.g., graph clustering, graph classification and graph matching. Existing research works on graph distance metric (or graph kernels) learning fail to…

Machine Learning · Computer Science 2020-02-11 Jiawei Zhang

There have lately been several suggestions for parametrized distances on a graph that generalize the shortest path distance and the commute time or resistance distance. The need for developing such distances has risen from the observation…

Machine Learning · Statistics 2015-03-17 Ilkka Kivimäki , Masashi Shimbo , Marco Saerens

In data analysis, there is a strong demand for graph metrics that differ from the classical shortest path and resistance distances. Recently, several new classes of graph metrics have been proposed. This paper presents some of them…

Metric Geometry · Mathematics 2018-11-02 Pavel Chebotarev

We introduce a general framework for analyzing data modeled as parameterized families of networks. Building on a Gromov-Wasserstein variant of optimal transport, we define a family of parameterized Gromov-Wasserstein distances for comparing…

Machine Learning · Statistics 2025-09-29 Mario Gómez , Guanqun Ma , Tom Needham , Bei Wang

Proximity measures on graphs have a variety of applications in network analysis, including community detection. Previously they have been mainly studied in the context of networks without attributes. If node attributes are taken into…

Social and Information Networks · Computer Science 2022-12-06 Rinat Aynulin , Pavel Chebotarev

This paper introduces a new class of efficient inter connection networks called as M-graphs for large multi-processor systems.The concept of M-matrix and M-graph is an extension of Mn-matrices and Mn-graphs.We analyze these M-graphs…

Information Theory · Computer Science 2007-07-13 R. N. Mohan , P. T. Kulkarni

This paper presents methods to compare high order networks, defined as weighted complete hypergraphs collecting relationship functions between elements of tuples. They can be considered as generalizations of conventional networks where only…

Social and Information Networks · Computer Science 2016-01-20 Weiyu Huang , Alejandro Ribeiro

Finding patterns in graphs is a fundamental problem in databases and data mining. In many applications, graphs are temporal and evolve over time, so we are interested in finding durable patterns, such as triangles and paths, which persist…

Databases · Computer Science 2024-03-26 Pankaj K. Agarwal , Xiao Hu , Stavros Sintos , Jun Yang

(Directed) graphs with node attributes are a common type of data in various applications and there is a vast literature on developing metrics and efficient algorithms for comparing them. Recently, in the graph learning and optimization…

Machine Learning · Computer Science 2024-02-20 Tristan Brugère , Zhengchao Wan , Yusu Wang

Complex networks are universal, arising in fields as disparate as sociology, physics, and biology. In the past decade, extensive research into the properties and behaviors of complex systems has uncovered surprising commonalities among the…

Other Quantitative Biology · Quantitative Biology 2015-06-26 Claire Christensen , Reka Albert

Evaluating graphs learned by causal discovery algorithms is difficult: The number of edges that differ between two graphs does not reflect how the graphs differ with respect to the identifying formulas they suggest for causal effects. We…

Machine Learning · Statistics 2024-07-12 Leonard Henckel , Theo Würtzen , Sebastian Weichwald